Gene Svir_19610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_19610 
Symbol 
ID8387288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2090533 
End bp2091156 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content72% 
IMG OID644976025 
Productubiquinone/menaquinone biosynthesis methylase 
Protein accessionYP_003133807 
Protein GI257055975 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0633091 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0668245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATGTTGA TGAACCGGGT CGAGACCGCG CTGGTCAACT CCCCGCCCCG GCGGTGGTTG 
CAGCGCTACT ACGAGGTGCC GTGGATGCGC CGGCTCGGCG GGCCGCTGCC ACCCGGGGCG
CGGGTGCTGG AGCTGGGCTG CGGGCCGGGC TACGGCACCC AGCTGATCCT GGACCGTTTC
GGCGCCGGCC ACGTCGACGC GATCGACCTG GACCCCGCGA TGATCACCCG GGCCCGGCGG
CGCCTGACCC GCCGCTACGG CCAGCGGGTC CGCCTCGCCC AGGGCAGCGC CACCGACCTG
CACACCACGC TGGGCGAGCC CCTCTCCCGC TACGACGCGG TGTTCGACTT CGCGATCATC
CACCACATCC CCCATTGGCC CGACGCCCTG GCCGAGATCG CCCGCGTCCT CACCCCGGGC
GGGCGGTTCT ACTTCGACGA AGTCACCGCC CTGGCCCTGG CCACCTCTAC CTACCGGCTG
CTGTTCGACC ACCCGGCCGA GAACCGCTTC ACCGCCGAGG AATTCCTCTC CGAGCTGGCA
CGCCACCATC TCGTCGTCGA CCAGCAGTAC CTGACCCGCC GCCGCGGCCG GTACGTGCTC
GGGGTGGCCA CCTACCGGCC CTAA
 
Protein sequence
MMLMNRVETA LVNSPPRRWL QRYYEVPWMR RLGGPLPPGA RVLELGCGPG YGTQLILDRF 
GAGHVDAIDL DPAMITRARR RLTRRYGQRV RLAQGSATDL HTTLGEPLSR YDAVFDFAII
HHIPHWPDAL AEIARVLTPG GRFYFDEVTA LALATSTYRL LFDHPAENRF TAEEFLSELA
RHHLVVDQQY LTRRRGRYVL GVATYRP