Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_18520 |
Symbol | |
ID | 8387179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1966600 |
End bp | 1968204 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644975920 |
Product | putative hydrolase, CocE/NonD family |
Protein accession | YP_003133702 |
Protein GI | 257055870 |
COG category | [R] General function prediction only |
COG ID | [COG2936] Predicted acyl esterases |
TIGRFAM ID | [TIGR00976] putative hydrolase, CocE/NonD family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.327698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCCGG CTCGCCACGG ACGTGCTCAC CCCCGCCCCC GAGCACGCCG CGCGCTCGCC TGCGCCGCGA GCATCCTCAC GGCACTGGCG GTGTCCGTGG CCCCGGTGGC CACGGCCGCA CCGAAGCCCG CCGCCCCCTC CACCGACGTA CTCCCGGACG ACCCCTTCTT CGCCTACGAC CGCCCACCGG AATACGAGGT GGTGCGCCAG GACGTGCGCG TGCCGCTGCG CGACGGCAGC CACGTGGTGT GCCAGCTGTA CCGGCCGGGG GACACGACGA CACGACCGGC GGCGGGACGG TTCCCCGGCA TCGTCTATGA GTACACCGCC TACGCCGACA ACGCGGAAGC TTTCGGAGCC GGTGCGGCGT ACTTCGTCCG TCGCGGCTAC AACGCACTCG TGTGCCAGGC CCGTGGCTCG GGCGGATCAC CGGGATCGCT GGACCCGTTC AGCCCCCAGG AACAGCGGGA CAACTACGAC GTCATCGAAT GGCTCGCCGC GCACCCCGCA TCGACCGGCC GCATCGGCCA GATGGGTGTC AGCTACGGCG GCCACAGCGC ACTGCTGGTC GCGGTGAACC AGCCGCCGCA CCTGGAGGCG ATCATCCCGA TGAACGGCAT TCACGACTGG TACGAGGACA CGATCTACCA CGGTGGTATC TACTCCGCCC GCATCCGCGA CTGGCAGCGA CAGGTGGCAC CCGACACCCT CCGAACCTAC GCGGAGCACC CGCTCTACGA CGACTTCTGG CGCGACCGCA GTGTCATGTC CCGCTGGGAC CGGCTCACCG TCCCCACGCT CGAGATCAAC GGCTGGTACG ACCGCTACCG GGACGGCATG GTGAAGAACT ACCGGGCCCG GCCCGACAAC GTGTGGCTGA TCTCCGGTCC GTGGGAACAC GGCTATCCGG AGGGCCAGTA CGCCGACATC GGCAAGGGCG CCTATCTCGC CTGGTGGGAC CACTGGTTGA TGCAGGACCC CGACGCCCCG CTGCCCGCCA CACACGTCAT CTCGTACGAA GTGCCGGGCC CCGGTGCGGG CCGAGGCTGG CAACGGTTCG AGCAGTGGCC ACCGCGTGAC GCCCATGAGC TGACCCTGCG GCTCGGAACG GACGGGGTCC TGAGCCGGAC GGCCGGACGC CCCGGGACGG TCACCTTCGA CGTCAACACC GAGCCGGAAC CGCCGCAAGA CCACGAGCGG TTGGTGTTCG GCACCGCACC GCTGCGCCGG GACCTGGTAC TCGCCGGGGA CGCGAGCGCC CGTATCAAGG CCTCGTTCGA GGCCGAGGAC GGGCACCTCG CGGTGGTGCT CTACGACCAG GCGCCCGACG GCACCAGCAC CAGGATCACC GAGGGCTGGC TCAAAGCCAG CCACCGTGAC ACGCACACCG CCCTCTCGCC GGTGGAACCG GGGCAGGTCT ACGAACTGGA CGTGCACATC CGCCCGACGC ACTACCGGCT GTCCGCAGGA CATCGCCTGG TCCTGCGGGT CTCCAGCGAC GACTACCCGG CGATCGATTC CAGTGCACCG CCGGGTCGGG TGGAGGTGCG GACGGGTGCC GCCGGATCGA CGTTGCACCT CACCGTCCGC AACGGACACC GTTAG
|
Protein sequence | MSPARHGRAH PRPRARRALA CAASILTALA VSVAPVATAA PKPAAPSTDV LPDDPFFAYD RPPEYEVVRQ DVRVPLRDGS HVVCQLYRPG DTTTRPAAGR FPGIVYEYTA YADNAEAFGA GAAYFVRRGY NALVCQARGS GGSPGSLDPF SPQEQRDNYD VIEWLAAHPA STGRIGQMGV SYGGHSALLV AVNQPPHLEA IIPMNGIHDW YEDTIYHGGI YSARIRDWQR QVAPDTLRTY AEHPLYDDFW RDRSVMSRWD RLTVPTLEIN GWYDRYRDGM VKNYRARPDN VWLISGPWEH GYPEGQYADI GKGAYLAWWD HWLMQDPDAP LPATHVISYE VPGPGAGRGW QRFEQWPPRD AHELTLRLGT DGVLSRTAGR PGTVTFDVNT EPEPPQDHER LVFGTAPLRR DLVLAGDASA RIKASFEAED GHLAVVLYDQ APDGTSTRIT EGWLKASHRD THTALSPVEP GQVYELDVHI RPTHYRLSAG HRLVLRVSSD DYPAIDSSAP PGRVEVRTGA AGSTLHLTVR NGHR
|
| |