Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_18500 |
Symbol | |
ID | 8387177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1964937 |
End bp | 1966262 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644975918 |
Product | Protein of unknown function (DUF1446) |
Protein accession | YP_003133700 |
Protein GI | 257055868 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCCTGG GTGCCGGAGC CGGGTTCGCC GGCGACCGGA TCGACCCGGC CGTGGATCTG GCCCGCCGGG GTGGACTGGA CTTCCTGATC TTCGAGTGCC TCGGTGAGCG GACCGTCGCC GCCGCCCACG CCCGCAGGCT GAGCGATCCG AGTACGGGCT ACGACCCGTT GCTGGCAGCG CGACTACGCG CGGTCCTGCC CCACACCCAT CGCGGCGGCA CGCGGGTGGT CACCAACTCC GGGGCCGCGA ACCCGGAAGC GGCAGGCGAG CTCGCCGCTC GCGTCGCCGC CGAACTCGGT GTGCCCTCCC GGATCGCGGT CGTCGGCGGT GACGACGTGC TGGACATCGT GCGCCGCGTC GACCCCGTGG TGTGGGAGAC CGACGCGCCG CTGTCGGCCT GCCCGGAGGA ACTGATCTCG GCCAACGCCT ACCTGGGCGC GGCCCCCGTC GTGGAGGCCC TCGAGCAGGG CGCCGACGTG ATCGTGACCG GACGGTTGGC CGACCCGGCC CTGTTTTTGG GGCCACTGGT GCACACGTAT GGCTGGGACG CCGACGACTG GGAACTGCTC GGCGCGGGCA CCGCGGTGGG GCATCTGCTG GAGTGCGCGG GCCAACTCAC CGGCGGGTAC TTCGCCGATC CCGGCACGAA ACCGGTTCCG GACCTCGCCC GGCTCGGGTT CCCGTTCGCC GACGTCGCCG CGGACGGCAC CGCCGAACTC CGCAAACTGG CGGACACCGG TGGCCGATTG GACACCCGGA CCTGCGCCGA GCAACTGCTG TACGAAGTGG ATGATCCCAC CGCATACCTG ACCCCCGACG TGGTCGCGGA CTTCTCCGAG GTGACCTTCA CCGGCACCGG CGAGAACCGG GTACGGGTGT CGGGCGCCTC CGGGCGACCT CGACCGGACC AACTCAAGGT GTCCCTCGGG TTCCGGGGAG GCTGGCTGGG GGAAGGACAG ATCAGCTACG CGGGTCCCCG CGCTCTGGAC CGGGCCCGCC TGGCCGCCGA CGTCGTGCGC GAACGGCTCG TCCGGGTCCA CGGAGTCGAC GAGAGCGCGA TCCGGGTCGA GTACATCGGC GCGGGCGCGG CGTTCCGCGG ACTCGTGGTC GATCCTCAGC CGTTCGAGGT GCGTCTGCGG GTGTCCGCCC GCGTCCCCGA GCCCGACCAG GCCGAGGTGA TCGGCTGGGA AGTGGAGTCG CTCTACACCA ACGGCCCGGC GGCGGGCGGT GGCGTCACCC GGACCACACG CGAGACCGTC GTCGTCCGCT CGTGCCTGTT GCCGCGCCAG CTGGTGACCC CGTTCGTCCA CCTGTTGGAG GCGTGA
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Protein sequence | MRLGAGAGFA GDRIDPAVDL ARRGGLDFLI FECLGERTVA AAHARRLSDP STGYDPLLAA RLRAVLPHTH RGGTRVVTNS GAANPEAAGE LAARVAAELG VPSRIAVVGG DDVLDIVRRV DPVVWETDAP LSACPEELIS ANAYLGAAPV VEALEQGADV IVTGRLADPA LFLGPLVHTY GWDADDWELL GAGTAVGHLL ECAGQLTGGY FADPGTKPVP DLARLGFPFA DVAADGTAEL RKLADTGGRL DTRTCAEQLL YEVDDPTAYL TPDVVADFSE VTFTGTGENR VRVSGASGRP RPDQLKVSLG FRGGWLGEGQ ISYAGPRALD RARLAADVVR ERLVRVHGVD ESAIRVEYIG AGAAFRGLVV DPQPFEVRLR VSARVPEPDQ AEVIGWEVES LYTNGPAAGG GVTRTTRETV VVRSCLLPRQ LVTPFVHLLE A
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