Gene Svir_17970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_17970 
Symbol 
ID8387124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1864808 
End bp1865140 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content63% 
IMG OID644975865 
Producthypothetical protein 
Protein accessionYP_003133647 
Protein GI257055815 
COG category 
COG ID 
TIGRFAM ID[TIGR02118] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.309891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAACC TCATCGTTCT CGCGGCCAAG CCCAGCGACT GGACCCATGA GCAGTTCATC 
GAGTGGTGGC GTGGTGAGCG CGCTGAGGTG ACCTACCCTT TGCCGGGGCT TCGGCGTTGG
CTCCACACCG AGATCCTCGA CACGATGGAC GAGAGGTCGA AGGGTTGGGA CGGTATCTCG
ATCCTGAGCT TCGACTCCCG GGAGGACCTC GACGCGGCGC TGGCCAGTGA GGAGTGGAAG
GCCGCCGTGG CGCACGTGGG TTCCATGCGC GGTCGTCGCA TGATCTTCCT GGGTGACGAG
AAGGTGATGG TTCCGGAACA ACCGGTGAGT TGA
 
Protein sequence
MYNLIVLAAK PSDWTHEQFI EWWRGERAEV TYPLPGLRRW LHTEILDTMD ERSKGWDGIS 
ILSFDSREDL DAALASEEWK AAVAHVGSMR GRRMIFLGDE KVMVPEQPVS