Gene Svir_17230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_17230 
Symbol 
ID8387053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1777818 
End bp1778483 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content67% 
IMG OID644975797 
Producthypothetical protein 
Protein accessionYP_003133579 
Protein GI257055747 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC TCGAGCACGA CGACTGGTCG ACCGGTGCTG CCGCCGGGTT CATCGACCCG 
GTCCCGATGG AGGACGATCC GACCGAGCTG TTCCCGGGGG ACACGGGCAC GCTGGAGGCG
GACGTGCGGC GGGTGTTGGT CCAACTGCTG CGCCGCAAGT TCCTGTTGGC CGAGAAGAAC
CCGGCGCAGT GGCGGACGTT GCTGGAGAAC CAGCAGATCA TCGAGTCGCG GATGCACGAT
TTGTTCATCC GGCTCGTGGT CGACCACGAG CGGGGCGTCG CCTACAAACA GCAGGTGCGG
TCGAGCGAAC TGGACGTGCC GATCCTGCTG CGGGACGAGT CCTACAACCG GGCCGAGACG
TTGGTGCTCG TGCACCTGCG CACCGTGTTC CAGCGGGAGC GCGGCTCGGG GGAGACGTCC
GCGCGCGTGG ACATCGAGGA ACTGGAACAG ACCGTGCTGA CCTACTTCGA TCCCGAGGAC
CACAACCTGG CCCGCACGCA ACAGGAAGTC CGTGGTGCGG TGCAGCGGTT GGCCACCGAG
GGACTGCTCG TCGAGGAGTC GGCGGGCCGG TATCGGATCA CACCGCTGGT GGAGGTCGTG
CTGAGCACGG AGAAGCTCGC CGAACTGCAG CAGTGGTTGC GCGAACGGAA CGAGGCCACG
GCGTGA
 
Protein sequence
MSELEHDDWS TGAAAGFIDP VPMEDDPTEL FPGDTGTLEA DVRRVLVQLL RRKFLLAEKN 
PAQWRTLLEN QQIIESRMHD LFIRLVVDHE RGVAYKQQVR SSELDVPILL RDESYNRAET
LVLVHLRTVF QRERGSGETS ARVDIEELEQ TVLTYFDPED HNLARTQQEV RGAVQRLATE
GLLVEESAGR YRITPLVEVV LSTEKLAELQ QWLRERNEAT A