Gene Svir_17080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_17080 
Symbol 
ID8387040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1758586 
End bp1759629 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content67% 
IMG OID644975784 
ProductFerric reductase like transmembrane component 
Protein accessionYP_003133566 
Protein GI257055734 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.507727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTGATC GGCGGAACAC GCGTCGCCGT AAAGGTGTGG ACCTTTCCGC CTTGCGAGCG 
GATGTGCGTG CCGCGGTGCC GGACGCGACC GCCGCCCTGG TCGTCACCGT CGCGATCTTC
GTCTGGCTTT ACGCACGAGC ACGCTCCGGA TCGTCTCCGA CCATCACGGT GATGCCGTTC
ATGGCCGAGG CCGACACCTA TGTCATGTAC TGGCTGTGTC AGGCGTTCGG CTGGTCGGCC
CTGCTGTGGG CGTGGGTCAC GACCATGCTC GGCTTGCTGC GTTCCGGCCA CACCCCAGGC
TGGTTCCCGG CCTCGCCCGC GCGGTTGGAA CGGTGGCACA GGACCACGAG TCTGACCACG
GTCGCGCTGA TGTTCCTCCA CGCCGCGCTG TTCTTCGCCG AACTGGTGCG CGAGAACAGG
GATGACAAGG CATGGGTGGG CCGACTGTGG AGCGCTTTCG TTCGCACTTT CGTCCCCGGT
GGATACGACT CGGGGACCGG CAAGGTCGCC ATCCTGCTCG GCCTGTTGGC CTTCTATCTC
GCGATTCCAC TCGGACTCGC CTACTACTTC CGGACGAGGC TGGGCGCACG GTCATGGCGT
GCGCTGCACC GGTTCGTGTT GGCGGTGTAC GTGCTGAGCG TGTGGCACAC CCTGCTGTAC
GGGACGAACG TGTGGTTCGA CGGGTGGCCG AGGACCACGT TGTGGCTGCT GCAACTACCG
CCCGCGCTGC TGCTGCTGGC ACGGCTGATC ATTCCCGCAC GCCCGAGCGA ACGCGGTGGC
GCGTTGCGCG GACGTCCGAT GGCGCTGACC CTGCGCATCC CGGCACTGAC GGCGGTGGCC
GCCACGATCG CCACGATCAT CGTGGTGGTG GTCAGCGGAC GGGACGGGGG CCGGACTCCC
GGGGTGGACG GAGCGGGTCT CAACGTGACG CCGGGCATGG TCTGGGCCGG ATTCGCTGTC
TTCGTCGTGA TCCTGGCCGT GGCAATGGGG CTTTCCCGAC GAGGGGAACC GGTGAGGACG
GCTGAACGGG CTGTCTCCCG TTAG
 
Protein sequence
MGDRRNTRRR KGVDLSALRA DVRAAVPDAT AALVVTVAIF VWLYARARSG SSPTITVMPF 
MAEADTYVMY WLCQAFGWSA LLWAWVTTML GLLRSGHTPG WFPASPARLE RWHRTTSLTT
VALMFLHAAL FFAELVRENR DDKAWVGRLW SAFVRTFVPG GYDSGTGKVA ILLGLLAFYL
AIPLGLAYYF RTRLGARSWR ALHRFVLAVY VLSVWHTLLY GTNVWFDGWP RTTLWLLQLP
PALLLLARLI IPARPSERGG ALRGRPMALT LRIPALTAVA ATIATIIVVV VSGRDGGRTP
GVDGAGLNVT PGMVWAGFAV FVVILAVAMG LSRRGEPVRT AERAVSR