| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_16810 |
|---|
| Symbol | |
|---|
| ID | 8387013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 1735316 |
|---|
| End bp | 1736089 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644975757 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003133541 |
|---|
| Protein GI | 257055709 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.403378 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATATCA CGGAATCGTT CAACGACGCG CTTCGGTCGG TCATCACCTT TCTGCCGAAG
TTCGCCGCTT TCTTGGTGAT CTTGCTCATC GGATGGTTGG TGGCGAAAGG CCTGCGTAAG
CTGGTCAACG TCATATTGGA ACGACTCAAT TTCGACCGTG CCGTCGAACG CGGAGGCATC
AAGCGCGCGT TGGAACGGTC GAAGTACGAC GCCAGCGGGC TGGTGGCGGC GATCGTGTTC
TACGCCGTGC TCTTGATCGC GTTGCAGATC GCGTTCGGGG TCTTCGGTCC GAACCCGGTG
AGCGACCTGC TGGCGGCCAT CGTGGCGTGG TTGCCACGGG CGGTCGTGGC CATCGTGATC
GTCGTCGTGG CCGCGGCCAT CGCCAACGGG GTCAAGGACA TCATCAACGG CACTCTCGGT
GGTCTCAGTT ACGGCTCCGT GTTGGCCACC GTGGCGCAGG TGTTCATCAT CGGTCTCGGT
GTGATCGCCG CGCTGAACCA GATCGGTGTC GCCACCGCGG TGACGACACC CGTGTTGATC
ACGGTGCTCG CGACGATCGG CGCGATTCTC GCCATCGGTG TGGGTGGCGG CCTGATGCGA
CCCATGCAGC AGCGTTGGGA ACGTTGGCTC GACCGGGCCG AGCAGGAAGT ACCGAACGCC
AAGGCGCAGG CCGAGGCCTA CCAGCGAGGC AAGGAAGACG TCACCGGCGC TCAGACCGAG
CCGATCGAGA CCCAAGAGGA GCAGACCCGC ACCGCCCACC CACCGCAGTC CTGA
|
|---|
| Protein sequence | MNITESFNDA LRSVITFLPK FAAFLVILLI GWLVAKGLRK LVNVILERLN FDRAVERGGI
KRALERSKYD ASGLVAAIVF YAVLLIALQI AFGVFGPNPV SDLLAAIVAW LPRAVVAIVI
VVVAAAIANG VKDIINGTLG GLSYGSVLAT VAQVFIIGLG VIAALNQIGV ATAVTTPVLI
TVLATIGAIL AIGVGGGLMR PMQQRWERWL DRAEQEVPNA KAQAEAYQRG KEDVTGAQTE
PIETQEEQTR TAHPPQS
|
|---|
| |