Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_16430 |
Symbol | |
ID | 8386975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1693157 |
End bp | 1694122 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644975719 |
Product | DNA-binding domain-containing protein, AraC-type |
Protein accession | YP_003133503 |
Protein GI | 257055671 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGACT GGGACTTCCC CCGTGGCGTC GCGAGCATCG CGCTGCTGGT GGAGTTCGCC GCCGAACGAG GAATCCCGGC CGACGTGGTA CTCGACGGCA GCGGCGTCGA CATCGCCACC GTGCGGGATC CGCTCGCGCA GGTGGAAGCG CGCCAGGAAC TGGCGGTGAT ACGCAACCTT CTTGCACATT GCGCCGCGGA TCCGGCCGAA CTCGGACACG AGGTCGGCTG TCGATACCAC GCCACGGCGT ACGGTATCTG GGGTTTCGCG GTCCTCAGCA GCCGGACGGT CGGCGATGCG ATGCGCCTGG CGCTGCGCTA CGTGGAACTG ACCTACGTGT TCTGTGCCCC CGAATTACGG CTGGAAGGCG ACCTCGCCGC CCTGCACTGG CGTACCACCG GGGTGCCGGT CGACGTCCGC CCGTTCCTGT TGGCCCGGGA CGTCGCGGCG AGCCGCACCC TGATCGTGGA ACTGCTGGGG GTGCGACCGG ACTTCGATCC GGTCAACGCC GTCATCAGCC TGCCGCGCGC GCTGCTCGAC CGGCGCATGC CCCAGGCCAA CGATCACACG GCCGCGGTAT GCGAACAACA GTGTCGCGAG TTGTTGGCGA AGCGGCGGGA ACGCGGCGGT ACGGCACGGC GAGTCCGCGA CCGACTGTTG GCCACCGACG GACTCCACAC GGACATGGAC ACCGTGGCGG CCGAACTCGC GATGACGGCG CGGACGTTGC GGCGACGACT GGCCGCCGAG GGAACCAGCT ATCGCGCACT GGTCGACGAG GTGCGACAGA CCCTGGCCGA GGAACTGCTG GCCACCCGCT CGTTGTCGGT CGAGCAGGTG GCCTATCGCC TCGGCTACGG CGACGCGGCC AGTTTCGTCC GCGCGTTCAC CCGGTGGAAG GGGGTCCCTC CCGGCAGGTA CGCGCGGTCC GGCCGGCCGG GGAGGCGTGA CCCAGCGACG CGGTGA
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Protein sequence | MVDWDFPRGV ASIALLVEFA AERGIPADVV LDGSGVDIAT VRDPLAQVEA RQELAVIRNL LAHCAADPAE LGHEVGCRYH ATAYGIWGFA VLSSRTVGDA MRLALRYVEL TYVFCAPELR LEGDLAALHW RTTGVPVDVR PFLLARDVAA SRTLIVELLG VRPDFDPVNA VISLPRALLD RRMPQANDHT AAVCEQQCRE LLAKRRERGG TARRVRDRLL ATDGLHTDMD TVAAELAMTA RTLRRRLAAE GTSYRALVDE VRQTLAEELL ATRSLSVEQV AYRLGYGDAA SFVRAFTRWK GVPPGRYARS GRPGRRDPAT R
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