Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_16350 |
Symbol | |
ID | 8386968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1683398 |
End bp | 1684321 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644975713 |
Product | cell envelope-related transcriptional attenuator |
Protein accession | YP_003133497 |
Protein GI | 257055665 |
COG category | [K] Transcription |
COG ID | [COG1316] Transcriptional regulator |
TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0716913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.935262 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGTTGA GTCTGTTGCT GGTGTTCCTG CTGTTCGTCG GCGTCGTGTG GTTCTATCTG GACTCCTCCA TCAACCGCAT CGACGCCCTG CCCGACTACG AGGGCAGGCC GGCGGCCGGT GAGGGCACGA ACTGGCTGCT TGTCGGTTCG GACTCCCGTG AGGGGCTCGA CGAGGAGCGG ATGGCGGAAC TGTCGACCGG CGATACGGGC GGCAAGCGTA CCGACACGAT CATGATCGCC CACATCCCGG ACAACGACAC GCCTCCGACG TTGCTCAGCC TGCCGCGTGA CTCACGGGTC GAGATTCCCG GACATGGGGT CAACAAGATC AACGCCGCGT TCTCGTTCGG TGGTGCTCCC CTGCTGGTGA GAACGGTGGA GCAGGCCACA GGGCTGCGCA TCGATCACTA CGCCGAGATC GGTTTCGGTG GCTTCGCCGA GGTGGTGGAT GCCATCGGCG GCGTCGAAAT GGACATTCCG GAAGAAATGC GCGACACCAA GACCGGGATC GTCATCCCCG CGGGCACGCA GATCCTGGAC GGCGCGCAGG CACTCGGTTT CGTCCGCATG CGTTACAGCG AGGCCACACC TCGGTCGGAC CTTGACCGGG TGGCCAACCA GCGGAAATTC ATCGGTGCGT TGGCGAGTGA GATCGCGAGC CCGGCCACGT TGCTCAACCC GTTCGACGTC TTCCCGCTAC TCGGTGCCGT GCCGGACGCG CTCACGCTCG ACGAGGACGA TCATCTGCAC CACCTGGTGG CGTTGGCGTG GGCGATGCGG GGGATCGGCG GCGGGGGAGT GGTCACCACC ACCGTGCCTG TCACCTCCGC CTCGGCCGAG AACTGGGATC CGGCGAAGTC GGAGGCGTTG TTCGAGGCGT TGCGCACCGA CTCGCCGATC CCGGAGGAAG TCCTCATGGA GTGA
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Protein sequence | MLLSLLLVFL LFVGVVWFYL DSSINRIDAL PDYEGRPAAG EGTNWLLVGS DSREGLDEER MAELSTGDTG GKRTDTIMIA HIPDNDTPPT LLSLPRDSRV EIPGHGVNKI NAAFSFGGAP LLVRTVEQAT GLRIDHYAEI GFGGFAEVVD AIGGVEMDIP EEMRDTKTGI VIPAGTQILD GAQALGFVRM RYSEATPRSD LDRVANQRKF IGALASEIAS PATLLNPFDV FPLLGAVPDA LTLDEDDHLH HLVALAWAMR GIGGGGVVTT TVPVTSASAE NWDPAKSEAL FEALRTDSPI PEEVLME
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