| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_16160 |
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| Symbol | |
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| ID | 8386949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1662440 |
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| End bp | 1663729 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644975694 |
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| Product | cysteine desulfurase |
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| Protein accession | YP_003133478 |
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| Protein GI | 257055646 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCA TGGACTCGCG ACCTTTGGAT GTCACGGCGG TGCGCGCCGA CTTCCCGATC
CTGTCCCGCA CCGTCCGCGA CGGTAAACCG CTGGTGTATC TGGACTCCGG GGCCACTTCC
CAACGTCCCG CCCCGGTGCT CGACGCCGAA CGACGTTTCC TGGAGACGTC CAACGCGGCC
GTGCACCGGG GAGCGCACCA GCTCTCGGAG GAGGCGACCG ACGCCTACGA ACAGGCGCGT
GCGAAGATCG CCGCGTTCGT GGGCGCCACG CCCGGTGAGG TCGTGTTCAC CAAGAACGCC
ACCGAGGGCA TCAACCTCGT CGCGTACGCG ATGAGCAACG CCGCCACGGC CGGTCCGGAG
GCGGAGCGGT TCTCGGTGGG GACCGGCGAC GAGATCGTCG TGACCGAAAT GGAGCACCAC
GCCAATCTGG TGCCATGGCA GCAGCTGTGT CAGCGCACGG GCGCGACATT GCGCTGGTTC
GAGGTGACTC CCGACGGTCG GCTCGATCTG TCCAAGCTGG ACGATCTCAT CAACGAGCGC
ACCAAGGTCG TCGCCTTCGC TCACCAGTCC AATGTGCTCG GCACGGTGAA CCCGGTGGAG
ACGCTGGTGC GCAGGGCTCG TGAGGTGGGC GCGCTGGTGG TGCTCGACGC CTGTCAGTCG
GTACCGCATT TCGCCGTGGA CTTCGCCGAG CTGGGTGTGG ATTTCGCGGT GTTCTCCGGG
CACAAGATGC TCGGTCCGTC CGGTATCGGC GTGCTGTACG GGCGTCGGGA ACTGTTGGAG
GTCATGCCAC CGTTCCTCAC CGGTGGGTCG ATGATCGAGC TGGTGCGCAT GGAGGGGTCG
ACCTTCGCGC CGCCGCCACA GCGGTTCGAG GCCGGTGTGC CGATGACCTC CCAGGCGGTC
GGACTCGGCG CGGCCGTGGA CTACCTGAAC GCGGTCGGCA TGGATCGGAT CGCCGAGCAC
GAGCGTGTGC TCACGGAACG GACCCTGGAG GGCTTGCGCT CTCTGCCGGG TGTCCGCATC
ATCGGTCCGC AGGACACCGT CGATCGAGGT GCCACGGTGG CGTTCGTGGT CGACGATGTG
CATCCGCACG ATGTCGGACA GGTACTCGAC AGCCTGGGCA TCGCCGTGCG CGTCGGGCAC
CACTGCGCGT GGCCGTTGCA CCGGGCCTGT AGTATCCCCG CATCGGTACG GGCGTCGTTC
TACCTCTACA ACGAACTGTC TGAAGTGGAT GTTCTCGTGA ACGGTGTGCG TGAGGCGCAG
CGGTTCTTCG GGGTCGGGGG AGTCTCCTGA
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| Protein sequence | MTTMDSRPLD VTAVRADFPI LSRTVRDGKP LVYLDSGATS QRPAPVLDAE RRFLETSNAA
VHRGAHQLSE EATDAYEQAR AKIAAFVGAT PGEVVFTKNA TEGINLVAYA MSNAATAGPE
AERFSVGTGD EIVVTEMEHH ANLVPWQQLC QRTGATLRWF EVTPDGRLDL SKLDDLINER
TKVVAFAHQS NVLGTVNPVE TLVRRAREVG ALVVLDACQS VPHFAVDFAE LGVDFAVFSG
HKMLGPSGIG VLYGRRELLE VMPPFLTGGS MIELVRMEGS TFAPPPQRFE AGVPMTSQAV
GLGAAVDYLN AVGMDRIAEH ERVLTERTLE GLRSLPGVRI IGPQDTVDRG ATVAFVVDDV
HPHDVGQVLD SLGIAVRVGH HCAWPLHRAC SIPASVRASF YLYNELSEVD VLVNGVREAQ
RFFGVGGVS
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