| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_15950 |
|---|
| Symbol | |
|---|
| ID | 8386928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 1636254 |
|---|
| End bp | 1637783 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644975673 |
|---|
| Product | glucose-6-phosphate 1-dehydrogenase |
|---|
| Protein accession | YP_003133457 |
|---|
| Protein GI | 257055625 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0364] Glucose-6-phosphate 1-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00871] glucose-6-phosphate 1-dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0643236 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.567165 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGAAG GTTGGGTCAA CCCGCTGCGC GACCCGCGCG ACAAGCGACT GCCGAGGATC
GCCGGGCCGT CAAGCCTGGT GATCTTCGGC ATCACCGGGG ACCTGTCGCG GAAGAAGCTC
ATGCCCGCGA TCTACGACCT CGCCAACCGT GGGCTGCTTC CCGCGGGGTT CTCCTTGATC
GGCTTCGCTC GCCGGGAGTG GGAGCACCAG GACTTCGGCC AACAGATACA CGACGCGGTG
GCCGAGTACG CACGGACACC GTTTCGGGAG TCGGTGTGGA ACCGGCTGGC CGAAGGCATC
CGGTTCGTCC ACGGTTCGTT CGACGACGAC GAGGCGTTCG ACGAGCTGGC CGAGACGGTT
CGGACCATGG CCGAGGAGCG CGGTACCGGC GGTAACACGG CGTTCTACCT GTCGATTCCG
CCGTGGGCCT TCCCGGTGGT GACGAAACAG CTCGCCCGGT GCGGGTTGGC GCAGGCCTCC
GAAGGCGTGT GGCGTCGGGT CGTGGTGGAA AAACCGTTCG GGCACGACCT GGAAAGCGCC
AGGGAACTGA ACGCCATCGT CAATGAGGTC TTCCCCGAGG ATTCGGTGTT CCGCATCGAC
CACTACCTCG GCAAGGAGAC GGTGCAGAAC ATCCTGGCGT TGCGGTTCGC CAACCAGTTG
TTCGAGCCGA TCTGGAACGC GAACTACGTC GACCACGTGC AGATCACGAT GGCCGAGGAC
ATCGGCATCG GTGGGCGCGC GAGTTACTAC GAGGGCATCG GCGCGGCACG CGACGTGATC
CAGAACCACT TGCTGCAGCT GCTCGCGTTG ACCGCGATGG AGGAGCCGGG GTCGTTCGAA
CCGGAGGCTC TGCGCGCCGA GAAGGTCAAG GTGTTGAGCG CGACCACACC GGTGGGGCCG
TTCGAGGAGA CCACGGCGCG TGGCCAGTAC GTCGGTGGGT GGCAGGGTGG CAAGAGGGTG
CTCGGCCTGC ACCAGGAGCA AGGCTTTCCG AAGGACTCCA CCACCGAGAC CTACGCGGCC
GTGACCCTGC AGGTGCGTAA CCGCCGGTGG GCGGGGGTCC CGTTCTACCT GCGCACGGGC
AAGCGGTTGG GGCGCAGGGT CACCGAAGTG GCCGTGATCT TCAAGCGGGC TCCGCACCTG
CCGTTCGACT CGACCGCGAC CGAGGAGCTC GGCGAGAACG CTTTGGTGAT CCGGGTGCAG
CCGGACGAGG GTGTGACGTT GCGGTTCGGT TCCAAGGTGC CGGGAACCAC GATGGAGGTC
CGCGACGTCA CGATGGACTT CGGCTACGGA CACGCGTTCA CCGAAAGCTC GCCGGAGGCC
TACGAGCGGT TGATCCTCGA CGTGTTGTTG GGCGAACCGT CGCTTTTCCC CGGTAACGAG
GAGGTCGAGC TGTCCTGGCA GATCCTCGAC CCCATCCTGA AGCATTGGGC CACTTTGGGT
CCGCCGGAGC CGTACGAACC GGGTTCGTGG GGGCCGCCGT CGGCGGAGGC GATGATGCAA
CGCACGGGCC GCCACTGGAG GCGTCCGTGA
|
|---|
| Protein sequence | MKEGWVNPLR DPRDKRLPRI AGPSSLVIFG ITGDLSRKKL MPAIYDLANR GLLPAGFSLI
GFARREWEHQ DFGQQIHDAV AEYARTPFRE SVWNRLAEGI RFVHGSFDDD EAFDELAETV
RTMAEERGTG GNTAFYLSIP PWAFPVVTKQ LARCGLAQAS EGVWRRVVVE KPFGHDLESA
RELNAIVNEV FPEDSVFRID HYLGKETVQN ILALRFANQL FEPIWNANYV DHVQITMAED
IGIGGRASYY EGIGAARDVI QNHLLQLLAL TAMEEPGSFE PEALRAEKVK VLSATTPVGP
FEETTARGQY VGGWQGGKRV LGLHQEQGFP KDSTTETYAA VTLQVRNRRW AGVPFYLRTG
KRLGRRVTEV AVIFKRAPHL PFDSTATEEL GENALVIRVQ PDEGVTLRFG SKVPGTTMEV
RDVTMDFGYG HAFTESSPEA YERLILDVLL GEPSLFPGNE EVELSWQILD PILKHWATLG
PPEPYEPGSW GPPSAEAMMQ RTGRHWRRP
|
|---|
| |