Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_15890 |
Symbol | |
ID | 8386922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1631171 |
End bp | 1631956 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644975667 |
Product | triosephosphate isomerase |
Protein accession | YP_003133451 |
Protein GI | 257055619 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.388365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.839835 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGCA AGCCGCTGAT CGCAGGCAAC TGGAAGATGA ATCTGAACCA CCTCGAGGCC ATCGCCCTGG TTCAGAAGAT CGCCTTCTCG TTGCCGGAGA AGTACTACGA GAAGGTCGAT GTGACGGTGC TTCCGCCGTT CACCGACATC CGTAGCGTGC AGACACTGGT CGACGGGGAC AAGCTCCTGC TCACCTACGG GGCTCAGGAC GTGTCGCCGC ACGACTCCGG TGCCTACACC GGCGACATCT CCGCTCCGAT GCTCGCCAAG CTGGGCTGCA CCTATGTCGT GGTCGGCCAC TCCGAGCGGC GCGAGTACCA CGGCGAGACC GACGAGCTCG TGAACAAGAA GGTCCGTGCC GCGCTCAAGC ACGGGCTGTC GCCGATCGTG TGTGTCGGCG AGCAGTTGGA GGTTCGGGAA GCCGGCGGTC ACATCGAGCA CACCACGTCT CAGCTCATCG CGGCGCTGAA GGGGCTCAAG ACCGAACAGG TGAACAACGT GGTGGTGGCC TATGAACCCG TGTGGGCCAT CGGCACGGGC CGTGTCGCCA CCCCTTCCGA CGCCGAAGAG GTGTGTGCCG CGTTGCGGAC GGCGCTGGCC GACAAGTACG GTGCCGACCT CGCCCAGCGG GTGCGGGTGC TCTACGGTGG CTCGGTGAAG TCGAGCAACG TGGCCGACCT CGTCAAGTGT GACAACGTCG ACGGAGCTCT CGTGGGTGGT GCCAGCCTCG ACGGTGAGGA GTTCACGAAA CTGTGTGCTC TCGCGGCGGG TGGCCCACTA CCGTGA
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Protein sequence | MARKPLIAGN WKMNLNHLEA IALVQKIAFS LPEKYYEKVD VTVLPPFTDI RSVQTLVDGD KLLLTYGAQD VSPHDSGAYT GDISAPMLAK LGCTYVVVGH SERREYHGET DELVNKKVRA ALKHGLSPIV CVGEQLEVRE AGGHIEHTTS QLIAALKGLK TEQVNNVVVA YEPVWAIGTG RVATPSDAEE VCAALRTALA DKYGADLAQR VRVLYGGSVK SSNVADLVKC DNVDGALVGG ASLDGEEFTK LCALAAGGPL P
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