Gene Svir_15890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_15890 
Symbol 
ID8386922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1631171 
End bp1631956 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content65% 
IMG OID644975667 
Producttriosephosphate isomerase 
Protein accessionYP_003133451 
Protein GI257055619 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0149] Triosephosphate isomerase 
TIGRFAM ID[TIGR00419] triosephosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.388365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.839835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCA AGCCGCTGAT CGCAGGCAAC TGGAAGATGA ATCTGAACCA CCTCGAGGCC 
ATCGCCCTGG TTCAGAAGAT CGCCTTCTCG TTGCCGGAGA AGTACTACGA GAAGGTCGAT
GTGACGGTGC TTCCGCCGTT CACCGACATC CGTAGCGTGC AGACACTGGT CGACGGGGAC
AAGCTCCTGC TCACCTACGG GGCTCAGGAC GTGTCGCCGC ACGACTCCGG TGCCTACACC
GGCGACATCT CCGCTCCGAT GCTCGCCAAG CTGGGCTGCA CCTATGTCGT GGTCGGCCAC
TCCGAGCGGC GCGAGTACCA CGGCGAGACC GACGAGCTCG TGAACAAGAA GGTCCGTGCC
GCGCTCAAGC ACGGGCTGTC GCCGATCGTG TGTGTCGGCG AGCAGTTGGA GGTTCGGGAA
GCCGGCGGTC ACATCGAGCA CACCACGTCT CAGCTCATCG CGGCGCTGAA GGGGCTCAAG
ACCGAACAGG TGAACAACGT GGTGGTGGCC TATGAACCCG TGTGGGCCAT CGGCACGGGC
CGTGTCGCCA CCCCTTCCGA CGCCGAAGAG GTGTGTGCCG CGTTGCGGAC GGCGCTGGCC
GACAAGTACG GTGCCGACCT CGCCCAGCGG GTGCGGGTGC TCTACGGTGG CTCGGTGAAG
TCGAGCAACG TGGCCGACCT CGTCAAGTGT GACAACGTCG ACGGAGCTCT CGTGGGTGGT
GCCAGCCTCG ACGGTGAGGA GTTCACGAAA CTGTGTGCTC TCGCGGCGGG TGGCCCACTA
CCGTGA
 
Protein sequence
MARKPLIAGN WKMNLNHLEA IALVQKIAFS LPEKYYEKVD VTVLPPFTDI RSVQTLVDGD 
KLLLTYGAQD VSPHDSGAYT GDISAPMLAK LGCTYVVVGH SERREYHGET DELVNKKVRA
ALKHGLSPIV CVGEQLEVRE AGGHIEHTTS QLIAALKGLK TEQVNNVVVA YEPVWAIGTG
RVATPSDAEE VCAALRTALA DKYGADLAQR VRVLYGGSVK SSNVADLVKC DNVDGALVGG
ASLDGEEFTK LCALAAGGPL P