Gene Svir_15730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_15730 
Symbol 
ID8386906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1616348 
End bp1617664 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content67% 
IMG OID644975651 
Productbifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 
Protein accessionYP_003133435 
Protein GI257055603 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGATGA TCGAGCCCGC CCCGTCGGTG GACATCGAAT CCATCGAACG GGCCATCGAG 
GACATCGCGA ACGGCCGCCC CGTGGTCGTC GTCGATGATG AGGACCGCGA GAACGAGGGA
GACCTGATCT TCGCTGCCGA GAAGGCGACA CCGGAGCTGC TCGCCTTCAT GGTGCGCTAC
ACCTCCGGCT ACATCTGCGT GGCGCTGACG GGCGAGGACT GCGACCGGCT CGACCTGCCG
CCGATGTACC ACAGCAACCA GGACCGGCGT GGTACCGCGT ACACCGTGAC GGTGGACGCC
GCCGAGGGCA TCGGGACCGG TATCTCCGCG ACCGACCGCT GCCACACCAT CCGGTTGTTG
GCCGACCCGA ACTCGAAGGC CTCCGACCTC ACCCGGCCCG GGCACGTCGT ACCGCTGCGC
GCCAAGGACG GCGGTGTCCT GCGTAGGCCG GGGCACACCG AGGCCGCCGT GGACCTCGCC
CGCATGGCGG GACTGGCGCC GGCGGGTGTG CTGTGCGAGA TCGTGTCCCA GAAGAACGAG
GGCGACATGG CCCGTCGGGA CGAGCTGGAG GTCTTCGCCG CCGACCACGA TCTTCAGCTG
ATCACGATCG CCGACCTCAT CGCGTACCGC AAGCGGCGGG AGAAGCAGGT CGAACGCGTG
GCTGAGGCGC GTATCCCACT GGCGGCGGGG ACGTTCCGCG CCATCGGTTA CGACAGCCTG
CTCGACGGTA TCGAGCACGT GGCCTTCGTC TACGGCGACA TCGGTGACGG TGAGGACATC
CTGGTGCGGG TCCACTCGGA ATGCCTGACC GGGGACGTGT TCGGATCGCT GCGGTGCGAC
TGTGGTCCGC AGCTGCAAGC GGCGCTGAAG GCGGTCGCGG ACGAGGGCCG GGGTGTCGTG
CTCTACGTGC GTGGGCACGA GGGCCGGGGC ATCGGCCTGT TGCACAAGCT GCAGGCCTAC
GAGCTGCAGG ACGCCGGTGC CGACACGGTG GACGCCAACC TGGCCCTGGG TGTGCCGGCC
GACGCCCGTG ACTACGGCAC CGGGGCGCAG ATCCTGTCGG ACCTCGGGGT GCGGTCGATG
CGACTGCTCA CCAACAACCC CGCCAAACGC GTGGGCCTGG AGGGCTACGG ACTACGGGTC
GTGGGCAGGG TCCCGCTGCC GATCTCACCC AATCCGGAGA ACTTCCGTTA CCTGAAAACC
AAGCGTGACA GGATGGGGCA CGAGTTGTCC CAATTGGAGC ACTTCGACGA AGTGGGTGCC
GATATCGGTG ACAACGGCAA CGGTAACGGC AAGGTCGCAG GTGCGGGTGG AATATGA
 
Protein sequence
MTMIEPAPSV DIESIERAIE DIANGRPVVV VDDEDRENEG DLIFAAEKAT PELLAFMVRY 
TSGYICVALT GEDCDRLDLP PMYHSNQDRR GTAYTVTVDA AEGIGTGISA TDRCHTIRLL
ADPNSKASDL TRPGHVVPLR AKDGGVLRRP GHTEAAVDLA RMAGLAPAGV LCEIVSQKNE
GDMARRDELE VFAADHDLQL ITIADLIAYR KRREKQVERV AEARIPLAAG TFRAIGYDSL
LDGIEHVAFV YGDIGDGEDI LVRVHSECLT GDVFGSLRCD CGPQLQAALK AVADEGRGVV
LYVRGHEGRG IGLLHKLQAY ELQDAGADTV DANLALGVPA DARDYGTGAQ ILSDLGVRSM
RLLTNNPAKR VGLEGYGLRV VGRVPLPISP NPENFRYLKT KRDRMGHELS QLEHFDEVGA
DIGDNGNGNG KVAGAGGI