Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_15270 |
Symbol | alaS |
ID | 8386860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1571174 |
End bp | 1573840 |
Gene Length | 2667 bp |
Protein Length | 888 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644975605 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_003133389 |
Protein GI | 257055557 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0205422 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.854238 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAAACTC ACGAAATCAA CAAGCGGTTC CTGGACTACT TCGAACGACA CGGCCACACC AAGGTGCCCA GTGCGTCGCT GATCCTGGAC GATCCCACGT TGCTGTTCGT CAACGCGGGC ATGGTCCAGT TCAAGCCGTA CTTCCTGGGC GAGGTGCCGC CGCCCTATCC CCGTGCCACG AGCGTGCAGA AGTGCGTGCG GACCGGGGAC ATCGACGAGG TCGGCAAGAC CACCCGCCAC AACACTTTCT TCCAGATGGC GGGCAACTTC TCGTTCGGTG ACTACTTCAA GCAGGGCGCC ATCGAACTGG CCTGGGAGTT CATCACCACC TCGCAGGACG AGGGGGGTCT GGGCCTGAAC CCGGACCGCT TGTGGGCCAC CGTGTACGAA CACGACGCCG AAGCGGCCGC ACTGTGGCGT GATGTCGCGG GACTTCCCTC GGAACGCATC CAGTTCCGGG GCCCGGACGA CAACTACTGG GACATGGGTG TGCCCGGCCC GTGTGGACCG TGTTCGGAGA TCTACTACGA CCGGGGTCCG GAGTACGGTC GCGAGGGCGG TCCGGTGGTG GACGAGGACC GTTACCTCGA GATCTGGAAC CTCGTGTTCA TGCAGGAGAT GCGTGGGGAG CTGAGCCCGA AGCAGGGCCA CGCACCCATC GGCGAGCTCC CGCAGAAGAA CATCGACACC GGCATGGGTG TCGAGCGGGT CGCCTATTTG CTGCAAGGGG TCGAGAACGT CTACGAGACC GACCTCGTAC GCCCGGTCAT CACCAAGGCC GAGGAGTTCT CGGGCCGCCG CTACGGCGCC GATCACGCGG ACGACGTACG GTTCCGTGTG ATCGCCGACC ACGCCCGCTC GGGTGTCATG CTGATCGCCG ACGGGGTCAC GCCCGGCAAC GAGGCCCGCG GCTATGTCCT GCGCAGGCTG CTGCGGCGCA TCGTGCGGTC GGTGCGGCTG CTGGGCGTGC ATGAGCCGGT GTTGCCGGAG TTCGCCGCGG TGGTGCGGGA CGCGATGGCC CCCTCCTACC CGGAGATCGC GCGGGACTTC GACCGCATCA GCGATGTGAT GCGCGCCGAG GAGGAGGCGT TCCTCGCCAC ACTGACCAGC GGTTCCCGCA TCTTCGACCT GGCCGCCCAG GAGACCAAGC GTGCCGGTGG CACGATCCTC TCCGGGGACA AGGCGTTCCA GCTGCACGAC ACCTACGGCT TCCCCATCGA TCTGACCTTG GAGATGGCGG CCGAGCAGGG GCTGTCGGTG GACGAAGAGG GTTTCCGCAC CCTCATGGAG CAGCAGCGGC AGCGGGCGAA GGCCGACGCC GCCTCCCGCA AGACCGGCCA CGGCGACTTG TCGGTCTATC GCAAGCTGCT CGAGGAGCAC GGCGAGACCG AATTCCTCGG CTACACCGAC CTCCAGGCCA CCGCGCGTGT CCTCGGGCTG CTCGTGGACG GGAAGCCCGT CCGCTCGGCG AGCGAGGGCA GCGTCGCCGA GCTGGTGCTC GACCGCACCC CGTTCTACGC CGAGGGCGGT GGGCAGATCG CCGACACCGG TGTGTTGATC GGTGAGGGTG CCGAGCTGAA GGTCCTCGAC GTGCAGCGGC TCGTGCCGGG ACTGTTCGTG CACCGCGTCG AGGTCGTCGC GGGTGAGGTC GGGGTGGACA CCCAGCTCAC CGCGTCGGTG GACGGTACGC GCCGTGCGTC CATCGCCCGT TCGCACTCGG CCACGCACCT CGTCCACGCG GCGGTGCGCG GCGCCTACGG CAACCGTGCC GCCCAGGCGG GTTCCCTCAA CACCCCCGGT CGCATGCGGT TCGACTTCAC CACGCCGAAG TCGGTGTCGG ACGACGTGCT CACCGAGGTG GAGGAGGAGG TCAACGACTA CCTCCAGACC GACGTCGAGG TGCAGGCGTA CACCACCACC AAGGACAGGG CCCTTGAACT CGGTGCGATC GCGTTGTTCG GCGAGAAGTA CGGGGACAGG GTCCGTGTGG TCGACATGGG CGACTACTCA CGCGAGTTGT GCGGTGGGAC CCACGTGGAG CGCATCGGCC AGCTCGGTCT GGTCAAGCTC GTCAGCGACT CCTCGGTCGG TTCCGGCGTG CACCGGGTGG AGGCGCTCGT GGGCACCGAC GCCCTGCGAC ACGTGCGTAA GGAGCAACTT TTGGTGTCGC AGTTGGCGAG CACACTCAAA GTGCCCGCCG ATGAGGTGCC GTCCCGGATC CAGGATGTGT TGACCCGGCT GCGCAACGCG GAGAAGGAGA TCGAGCAGCT GCGGCTGCGC GAGGTGTTGA ACTCCGCGTC GACGCTCGCC GAACGGGCTC GAGAGATCGC CGGTGTCTCC GTCGTCGCCG AGCGACTCGA CCAGGAGGTC GACGCCGGGG CGTTGCGCAA GCTCACCGGC GAGGTGCGTA ATCGACTGGG ATCGCGGCCG GGCGTGGTGG CGTTGTTCGC GCCCTCCGGT GAGGGCAAGG TGAGTTTCGT CGTCGCCACC ACCGCCGAGG CGCGTGACGC CGGTCTGGCG GCGGGCAAGC TCGTCCCCGC GTTCGCCGAA CTGGTCGGTG GTCGGGGTGG GGGTAAGCCC GACATGGCGC AGGGCGGTGG CAGCAGACCC GAGGGTGTCG AGCAGGCTAT CGAGGCCCTC CGCGCGGCGG TCGCGGCGAA CCGGTGA
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Protein sequence | METHEINKRF LDYFERHGHT KVPSASLILD DPTLLFVNAG MVQFKPYFLG EVPPPYPRAT SVQKCVRTGD IDEVGKTTRH NTFFQMAGNF SFGDYFKQGA IELAWEFITT SQDEGGLGLN PDRLWATVYE HDAEAAALWR DVAGLPSERI QFRGPDDNYW DMGVPGPCGP CSEIYYDRGP EYGREGGPVV DEDRYLEIWN LVFMQEMRGE LSPKQGHAPI GELPQKNIDT GMGVERVAYL LQGVENVYET DLVRPVITKA EEFSGRRYGA DHADDVRFRV IADHARSGVM LIADGVTPGN EARGYVLRRL LRRIVRSVRL LGVHEPVLPE FAAVVRDAMA PSYPEIARDF DRISDVMRAE EEAFLATLTS GSRIFDLAAQ ETKRAGGTIL SGDKAFQLHD TYGFPIDLTL EMAAEQGLSV DEEGFRTLME QQRQRAKADA ASRKTGHGDL SVYRKLLEEH GETEFLGYTD LQATARVLGL LVDGKPVRSA SEGSVAELVL DRTPFYAEGG GQIADTGVLI GEGAELKVLD VQRLVPGLFV HRVEVVAGEV GVDTQLTASV DGTRRASIAR SHSATHLVHA AVRGAYGNRA AQAGSLNTPG RMRFDFTTPK SVSDDVLTEV EEEVNDYLQT DVEVQAYTTT KDRALELGAI ALFGEKYGDR VRVVDMGDYS RELCGGTHVE RIGQLGLVKL VSDSSVGSGV HRVEALVGTD ALRHVRKEQL LVSQLASTLK VPADEVPSRI QDVLTRLRNA EKEIEQLRLR EVLNSASTLA ERAREIAGVS VVAERLDQEV DAGALRKLTG EVRNRLGSRP GVVALFAPSG EGKVSFVVAT TAEARDAGLA AGKLVPAFAE LVGGRGGGKP DMAQGGGSRP EGVEQAIEAL RAAVAANR
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