Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_15220 |
Symbol | aspS |
ID | 8386855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1565750 |
End bp | 1567522 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644975600 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_003133384 |
Protein GI | 257055552 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.925983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.271227 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTTCGCA CCCACGACGC CGGCACGCTG CGTGTCGAAC ACGTTGGCCA GACAGTCACC CTCACCGGTT GGGTGGCCCG GCGACGCGAT CACGGCGGGG TGATCTTCAT CGATCTCCGG GACGCCAGCG GAGTCGCCCA GATCGTCTTC CGCGAGGGCG AGATGGCCGA ACGTGCGCAC GCCCTGCGTT CGGAGTACTG CCTCAAGGTC ACCGGCGAGG TCGCCCGGCG ACCCGAGGGC AACGAGAACC CGGAGATCCC CACCGGCGAC ATTGAGGTGT TCGTCACCGA GCTGGAGGTG TTGTCGGAGT CGGCGGCGCT GCCGTTCCCG ATCGACGAAC GGCTGGAGGT CGGTGAGGAG ACCCGGCTGC GCTACCGCTA CCTCGACCTG CGTCGCGAGG GACCGGCCCG CATCATGCGC CTGCGCAGCG AGGTCAACCG GGTCGCGCGC GAGGTGCTGC ACCGGCACGG CTTCATCGAG GTCGAGACGC CGACGATGAC CCGTTCCACG CCCGAGGGGG CCCGCGACTT CCTGGTCCCC GCACGGCTCA AGCCGGGTTC CTGGTACGCC TTGCCGCAGT CGCCGCAGTT GTTCAAGCAG CTGCTCATGG TCGGCGGTCT GGAACGCTAC TACCAGATCG CGCGGTGCTA TCGCGACGAG GACTTCCGCG CCGATCGCCA GCCCGAGTTC ACCCAACTCG ACATCGAGAT GAGCTTCGTC GAGCAGGACG ACGTCATGGC GCTCGCCGAG GACGTGTTGT CGGCGCTGTG GAAGCTCGCC GGGGTGGAGG TGTCCACGCC GTTCCGGCGG ATGAGCTACG CCGAGGCGAT GAGCAAGTAC GGCACCGACA AGCCGGACCT GCGTTTCGGG CTGGAGTTGG TCGAGCTCAC CGACTTCTTC GCCGACACAC CGTTCCGGGT CTTCCAGGCA CCGTACGTCG GTGCCGTGGT CATGCCGGGT GGAGCGGACC AGCCGCGGCG TACGCTCGAT GCGTGGCAGG AATGGGCCAG ACAGCGTGGT CACAAGGGTC TGGCCTATGT CCTCGTGGGT GAGGACGGCA CGCTCGGTGG GCCGGTCGCC AAGAACCTGT CCGAACACGA ACGTGCGAAC CTGGTCGAGG CCGCGGGCGC GAAGCCGGGT GACTGCATCT TCTTCGCCGC GGGCAAGCCG AAGGACGCCC GACAGCTGCT GGGCATGGCC CGGGTCGAGA TCGCCCACCG GCTCGGCATG ATCGACGAGA ATGCCTGGTC GTTCGTGTGG GTGGTGGACT TCCCGATGTT CGAGGCGGCC GACGAGAGCG ACGACGTCAA CGTCGGCGGT GGCAAGTGGA CCGCGTTGCA CCACGCCTTC ACCTCCCCGG CTCCGGAGTG GATCGACAAG TTCGAGCAGG ATCCGGGTAA CGCGCTGGCC CAGGCCTACG ACATCGTCTG CAACGGCCAC GAGATCGGCG GCGGATCGAT CCGTATCCAC CGGGCCGATG TGCAAAAGCG TGTGTTCGAG GTCATGGGGT TGTCCGAGGA GGAGGCCCAG GACAAGTTCG GTTTCCTGCT CGACGCCTTC CAGTACGGTC CTCCGCCGCA CGGTGGTGTC GCCTTCGGCT GGGACCGCAT CGTGATGTTG CTCGCGGGTG CCGAGTCGTT GCGGGAGGTG ATCGCATTCC CGAAGACGGG AGGCGGTTAC GACCCGCTCA CGGGCGCTCC GGCACCGATC ACCGCACAAC AGCGTAAGGA AGCGGGTGTC GACGCCAAGC CGGCGGCGAC GCCACAACGC TAA
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Protein sequence | MLRTHDAGTL RVEHVGQTVT LTGWVARRRD HGGVIFIDLR DASGVAQIVF REGEMAERAH ALRSEYCLKV TGEVARRPEG NENPEIPTGD IEVFVTELEV LSESAALPFP IDERLEVGEE TRLRYRYLDL RREGPARIMR LRSEVNRVAR EVLHRHGFIE VETPTMTRST PEGARDFLVP ARLKPGSWYA LPQSPQLFKQ LLMVGGLERY YQIARCYRDE DFRADRQPEF TQLDIEMSFV EQDDVMALAE DVLSALWKLA GVEVSTPFRR MSYAEAMSKY GTDKPDLRFG LELVELTDFF ADTPFRVFQA PYVGAVVMPG GADQPRRTLD AWQEWARQRG HKGLAYVLVG EDGTLGGPVA KNLSEHERAN LVEAAGAKPG DCIFFAAGKP KDARQLLGMA RVEIAHRLGM IDENAWSFVW VVDFPMFEAA DESDDVNVGG GKWTALHHAF TSPAPEWIDK FEQDPGNALA QAYDIVCNGH EIGGGSIRIH RADVQKRVFE VMGLSEEEAQ DKFGFLLDAF QYGPPPHGGV AFGWDRIVML LAGAESLREV IAFPKTGGGY DPLTGAPAPI TAQQRKEAGV DAKPAATPQR
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