Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_15150 |
Symbol | |
ID | 8386848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1557931 |
End bp | 1558752 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644975593 |
Product | branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
Protein accession | YP_003133377 |
Protein GI | 257055545 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.784526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.178512 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACGCCC AGCTCAACGG TCGTCCCGCC ACGGCGGACC AGCTCGCCGC TGCCGCCGTG GGCGGGTACG GCCACTTCAC CACGCTGCGG GTGACCGATC GCCGGGCACG GGGACTCGAC GAGCACCTCG ATCGCCTGGC CGACGGCAAC CGCCGCGTTT TCGACGCCGA GCTGGACCGC GCGTTCGTCC GCGCGTGCCT GCGACGCGCC ACCCCCGCCG AGGGGACCGT GATCGCCAGG GTGACGTCCG TCGGTCCGCC CTCGACGTGT TCACCCGACG TCCTGGTGAC AGTGCGGGAG GCGGCGAACG CGCCGACACC GGTGCGACTG CGTACGGTGC GTGCCGACCG GGCGATTCCC ACGATCAAGC ACGTGGGCAC GTTCGCACAG CATTTCCATG CCCGCTCCGC CCGAAACGCC GGGTACGACG ACGCGCTGTT CGTCACCGCC GACGGCTACG TCAGCGAGAC GTCGGTGTGC AATGTGGGCT TCATCGAGCA CGCCCGTAAC CGCATCGGCG CCGCCGATGG CGACAGCGGG ACCGTCGGCG AGGACATCAC CGTCGTATGG CCTAGCGCGC CGATGCTCAC CGGGGTCACC CAGACGCTGC TGACCCGGGG GCTGGAGCGG CTCGGCGTGG CCGTGGAGCA CCGGCGCATC CCGCTTTCCG AACTCGGCAT GTTCCGTGCG GCGTTCGTGT GCAACGCGGG CAGCCTGCTC CGTCCGGTCA CGGCCGTGGA CGACGTGACG TTCCCCGTCG ATCCGGAATC ACTGGCTCTG CTGTGGCGGG CGTACGAAAC GAATCCCGCC GAACCGATCT GA
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Protein sequence | MHAQLNGRPA TADQLAAAAV GGYGHFTTLR VTDRRARGLD EHLDRLADGN RRVFDAELDR AFVRACLRRA TPAEGTVIAR VTSVGPPSTC SPDVLVTVRE AANAPTPVRL RTVRADRAIP TIKHVGTFAQ HFHARSARNA GYDDALFVTA DGYVSETSVC NVGFIEHARN RIGAADGDSG TVGEDITVVW PSAPMLTGVT QTLLTRGLER LGVAVEHRRI PLSELGMFRA AFVCNAGSLL RPVTAVDDVT FPVDPESLAL LWRAYETNPA EPI
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