Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_15040 |
Symbol | |
ID | 8386837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1546459 |
End bp | 1547208 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644975582 |
Product | conserved hypothetical protein TIGR01033 |
Protein accession | YP_003133366 |
Protein GI | 257055534 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.105495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGCC ACTCCAAGTG GGCCACCACC AAACACAAGA AGGCCGCCCT CGACGCCAAG CGTGGCAAGC TGTTCGCGAA ACTTGTCAAG AACATCGAGG TCGCCGCGCG AACCGGCGGG GGCGACCCCG ATGGCAACCC CACCCTGTAC GACGCCATCC AGAAGGCGAA GAAGAACTCC GTCCCTCAGG ACAACATCGA GCGTGCGCGC AAGCGTGGTG CCGGTGAGGA AGCCGGTGGT GCGGACTGGC AGAACATCAT GTACGAGGGG TACGCGCCGG GTGGGGTCGC GGTGCTCATC GAGTGCCTGA CCGACAACAA GAACCGGGCG GCGTCCGAGG TCCGCACCGC GCTGACGCGG AACGGCGGTT CGTTGGCCGA CCCCGGCTCG GTGTCCTATC TGTTCAACCG CAAGGGCGTC GTCATCATGC CCAAGAACGG TGTGTCCGAG GACGACGTGC TGATGGCCGT GCTCGACGCG GGTGCCGAGG AGGTCAACGA CCTCGGGGAG AACTACGAGA TCATCTCCGA GGCCGGTGAC ATGGTGGCCG TCCGTACCGC GTTGCAGGAA GCGGGCTACG ACTACGAGTC GGCGGAGGCG AGCTTCCTGC CCTCGGTGCA CGTGCCGCTC GACGCCGAGA CCGCTCGGAA GGTCTTCCGG CTGATCGAGG CGCTCGAGGA CTGCGACGAC GTCCAGAACG TGTACTCGAA CTTCGACGTC AGCGACGAGG TGCTGGCCGA GGTCGGCTGA
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Protein sequence | MAGHSKWATT KHKKAALDAK RGKLFAKLVK NIEVAARTGG GDPDGNPTLY DAIQKAKKNS VPQDNIERAR KRGAGEEAGG ADWQNIMYEG YAPGGVAVLI ECLTDNKNRA ASEVRTALTR NGGSLADPGS VSYLFNRKGV VIMPKNGVSE DDVLMAVLDA GAEEVNDLGE NYEIISEAGD MVAVRTALQE AGYDYESAEA SFLPSVHVPL DAETARKVFR LIEALEDCDD VQNVYSNFDV SDEVLAEVG
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