Gene Svir_15010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_15010 
Symbol 
ID8386834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1545053 
End bp1545823 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content69% 
IMG OID644975580 
Productpredicted branched-chain amino acid permease (azaleucine resistance) 
Protein accessionYP_003133364 
Protein GI257055532 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) 
TIGRFAM ID[TIGR00346] 4-azaleucine resistance probable transporter AzlC 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.509076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCGA TATGGCGAAC CCTAGACCGT GATCTCGCTC GGAACATCGC CTTGGTGTGT 
CTGGCCGACG GCATCGTCGG CCTGTCCTTC GGCGCGATCA CCGTCGGTTC CGGCCTGCCG
CTGTGGGCTC CCATGCTGCT GTCGGTGGTG GTCTTCGCCG GGGCCGCGCA GTTCATGTTC
GTCGGCCTCG TGGCCTCCGG CGGGAACCCG ATCGCGGCCG TCGTGGCCGG ACTCCTCATC
AACGCCCGTC ACCTGCCGTT CGGGTTCGCC ATCGGTGACG TGCTCGGGCG GCGTTGGCCG
ACCCGTCTTC TCGGTACGCA CCTGATGATC GACGAGACGG TCGCTTTCGC CCTCGCGCAG
CGCGATCTCA CCCGACGTAA GGCCGCCTAC TGGGCCTGCG GCATCGGGCT GTTCACCATG
TGGAACATCG GTGTGGTCAT CGGCGCGTTC CTCGGCACCG CGGTCACCGA CACCGATCTG
CTCGGCCTCG ACGCCGCATT CCCGGCGGTC CTGCTCGCGC TCGTGTTGCC GTCGTTGCGT
GATCCGGACA CGCGCCGGGC GGTACTGGTC GGAGTGGCCG TGGCGCTGGC CACCGCGCCG
TTCGTTCCGG CGGGGCTTCC CGTCCTGCTC GCGTTGGTGG GCGTGTTGCT GGCGCTGCGC
CGCCAAGACG CGGATGAGCC CGGCGAGCAC GAGGCCACCG ACGAGTCGCA GCCGGCCTCC
GAGATCTCCC CGGCCCCGGA CCGAGCAGGA AAGGACACGA CGTCGTGCTG A
 
Protein sequence
MRSIWRTLDR DLARNIALVC LADGIVGLSF GAITVGSGLP LWAPMLLSVV VFAGAAQFMF 
VGLVASGGNP IAAVVAGLLI NARHLPFGFA IGDVLGRRWP TRLLGTHLMI DETVAFALAQ
RDLTRRKAAY WACGIGLFTM WNIGVVIGAF LGTAVTDTDL LGLDAAFPAV LLALVLPSLR
DPDTRRAVLV GVAVALATAP FVPAGLPVLL ALVGVLLALR RQDADEPGEH EATDESQPAS
EISPAPDRAG KDTTSC