Gene Svir_14020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_14020 
Symbol 
ID8386735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1444097 
End bp1444951 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content69% 
IMG OID644975483 
Producthypothetical protein 
Protein accessionYP_003133271 
Protein GI257055439 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.333633 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAACC CGTTGGTCGT GGACAACACC GACCCGGACA ACTTCTACGC CGAGGACCGT 
AAGGACGGCG ACCCGTTCAC GAAGATGGAA ATCCCGAGCC GGGACGGCAC CGGGTTCATG
ACCGGGATCA CGCCGTTCGA GGCCGGGTGG GCGATCGCCG AAGGCATCGA CCGGGGCGAT
TGGGCGTTGT CGGTCAGTGG CCTGGTCGGG GTGGGGCTCG ACACCGCCGC CGCCGTCACG
GACCCGATCG GCTTCGTCGC GGGCCAGGTG ATCTCGTGGA TGCTCGAACA CATCGAGCCT
GCGCGGGAGG CGCTCGACAA GCTCGCGGGC AACCCGGACA TGGTGAAGGC CTACGCGGAG
TCGTGGACCA ACATCGAGAA GGAGATGACC GAGCTCGCCG AGGAGGTCAA GAGCGCGGCT
CCGGCGGAGA CGCAGAACTG GCTGGGCGGT GCCGCTGAGG CCTACCGCGC GAAGGCGGAG
GAACTCTCCG CCGTGTACAA CAACGCGGCG GGCGCGGCGC ACGGCATCGC CGGTCTGACC
GTGGGGATGG CCGAGGTCGT CAACGGTGTC CGCACGGCGG TGCGGGATCT GCTCGCCAGC
ATCGCGGGCT CCCTGGTGAG CTGGACCATC GAACTGCTGT GTTCGCTGGG CACGGCCGCC
CCCGCCGTGG CCGCCCAGGC CACGACCGCG ATCTCCCGCG TGGTGAGCAA GGTGGGCAAG
CTGCTGACAG CGCTGGGGAA GGCGATGACG GACGCCATCA CCTGGCTGAC CGTGCTCCGT
GACCTGTTCG ACGGCCTCAT CCGCGCGCTC GACGCCTGGT CCGACAGCCA ACAGACGGCG
CCGACGGTCG TGTAG
 
Protein sequence
MNNPLVVDNT DPDNFYAEDR KDGDPFTKME IPSRDGTGFM TGITPFEAGW AIAEGIDRGD 
WALSVSGLVG VGLDTAAAVT DPIGFVAGQV ISWMLEHIEP AREALDKLAG NPDMVKAYAE
SWTNIEKEMT ELAEEVKSAA PAETQNWLGG AAEAYRAKAE ELSAVYNNAA GAAHGIAGLT
VGMAEVVNGV RTAVRDLLAS IAGSLVSWTI ELLCSLGTAA PAVAAQATTA ISRVVSKVGK
LLTALGKAMT DAITWLTVLR DLFDGLIRAL DAWSDSQQTA PTVV