| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_13630 |
|---|
| Symbol | |
|---|
| ID | 8386699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 1405475 |
|---|
| End bp | 1406020 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644975447 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003133237 |
|---|
| Protein GI | 257055405 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.687713 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.808415 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGCAC CGGCCTTCCC CGGGCAGGCA CGCATCGTCG TGCCGGGTGC ACAGATCCAA
TTCCCGAACA CGGGACCGTT GGTGCTGGGC ACCATGGGCA GTCGTTTCCT CGCCCGCCTC
GTCGACGGTC TCATCATTGG TTTCCCCCTC GGGATCATCA TGATGATCCT GCAGTTCGCG
GTGGTCGCCT CTGACCCGGA CATGTGGTGG GTCGTGCTTT TGATGGCGCC GCTCTACTCC
ATCACGATGC TGCTCTACGA GGGCATGATG ATCTCCTCGC GGGGCGCCAC GGTGGGCAAG
AGTGTCGCCG GGCTCCGGGT CGTCACGGCC AACTCGGCCG GCCAGCACGG TGCGGGGACC
GGCAGCGGTC CCGCGTTCAC CCGGATCGCG GTGATGATCC TGCCCGCTCT GGTGCCGTTC
CTCGGCGGTT TCATCTCCTT GCTGATGATG CTGTCGCCGT TCTTCGACGA GCAGGCCAGG
CAGGGGTGGC ACGACAAGGC CGCCAAGACG TACGTGATCT CCACCAAGGC GATGCCGATG
TACTGA
|
|---|
| Protein sequence | MGAPAFPGQA RIVVPGAQIQ FPNTGPLVLG TMGSRFLARL VDGLIIGFPL GIIMMILQFA
VVASDPDMWW VVLLMAPLYS ITMLLYEGMM ISSRGATVGK SVAGLRVVTA NSAGQHGAGT
GSGPAFTRIA VMILPALVPF LGGFISLLMM LSPFFDEQAR QGWHDKAAKT YVISTKAMPM
Y
|
|---|
| |