Gene Svir_13460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_13460 
Symbol 
ID8386682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1389418 
End bp1390629 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content70% 
IMG OID644975430 
Productsubtilisin-like serine protease 
Protein accessionYP_003133220 
Protein GI257055388 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1404] Subtilisin-like serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCACAT CCAGGAAGAC CACGCGGTCG GCGCTCACGG GCGTTGTCGC GATGGGTGTG 
ACGGGATTGT TCGCCGCAGG GGTGGCTCCC GCGCAGGCCG AGGTGGGGCA GGTTCTCCAT
GCCGGCTCGG CACATGCTGT CGACGGCAGC TACATCGTCG TGTTGAAGGA CGAGGCGCAG
GGTGCCGTGC TGTCGAGCTC GGTGACGGTG CAGGCGCAGT CCCTGGCCGC CGACTACGGC
GTCCAGGTGC AGCGGACCTT CGACACCGCA CTCAACGGAT TCACGATCAA GGCCGACGCG
GCGGCGGCGA AGCGGCTGGC GGCCGACGAC GCCGTGGAGT TCGTCAGCCA GAACCAGCGC
TTCCACATCG CGGACGCGCC GGGGGCGCAG GCGACGGCGT CGTGGGGACT TGACCGCATC
GACCAGCGCG ACCTGCCGCT GGACGACTCC TACACGCCGC CGACCTCGGC CTCGGAGGTC
ACGGCGTACG TGATCGACAC CGGTGTGTCG GAGCACAGTG ACTTCGGAGA CCGGCTCCAG
CCCGGTGCCG ACTTCGTCGA CAACGACGAC GACGCGACCG ATGAGAACGG ACACGGCACG
CACGTGGCCG GCACGATCGG CGGCGAGCGG TACGGTGTCG CCCCCGACGT CAACCTCGTC
GGTGTCCGGG TCCTCGACGC CAACGGCAGT GGCACCACCG CCCAGGTGAT CGCGGGCATC
GAGTGGGTCG CCGAGAACGC CTCCGGTCCC TCGGTGGCCA ACATGAGCCT CGGCGGCCCG
GCCGACGCCG CTTTGGACGA GGCGGTGCGG GGTGCGATCG AGGCCGGTAT CACCTTCGGT
GTCGCCGCGG GCAACGAGTC GTCCGACGCG AGCGGTTCGT CCCCGGCTCG GGTTCCCGAG
GCCATCACGG TGGCCGCCAG CGACCAGGAC GACTCCGAGG CGTACTTCTC GAACTACGGT
GACGTCGTGG ACCTGTACGC GCCCGGTGTG GACATCACCT CGGCCTGGCA CGACGGTGGG
GAGAACACCA TCAGCGGCAC GTCGATGGCC ACGCCGCACG TGGTGGGTGC CGCCGCGCTG
TACCTGGCCG ACAACACGGA CGCCACTCCC GCCGAGGTCG CCGACGCGCT GACCTCCTCG
GCGACCGAGG GCGCCATCAC CGACCCGACG GGTTCGACGC CCAACCTCCT GCTGTACGTG
GGTCAGGAGT GA
 
Protein sequence
MGTSRKTTRS ALTGVVAMGV TGLFAAGVAP AQAEVGQVLH AGSAHAVDGS YIVVLKDEAQ 
GAVLSSSVTV QAQSLAADYG VQVQRTFDTA LNGFTIKADA AAAKRLAADD AVEFVSQNQR
FHIADAPGAQ ATASWGLDRI DQRDLPLDDS YTPPTSASEV TAYVIDTGVS EHSDFGDRLQ
PGADFVDNDD DATDENGHGT HVAGTIGGER YGVAPDVNLV GVRVLDANGS GTTAQVIAGI
EWVAENASGP SVANMSLGGP ADAALDEAVR GAIEAGITFG VAAGNESSDA SGSSPARVPE
AITVAASDQD DSEAYFSNYG DVVDLYAPGV DITSAWHDGG ENTISGTSMA TPHVVGAAAL
YLADNTDATP AEVADALTSS ATEGAITDPT GSTPNLLLYV GQE