Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_13440 |
Symbol | |
ID | 8386680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1387182 |
End bp | 1388801 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644975428 |
Product | acyl-CoA synthetase |
Protein accession | YP_003133218 |
Protein GI | 257055386 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.921764 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACGGC CGACCGTGGC CGGTGTGATG AGTCGTGCGG TGGAGGCAGT ACGCAGCCTC GCGGTGTTGT ATCGCGCGGG ACTGGCCCCG ATACCCCGTC TCGACGAGGG TATTCGGTCG ATCATCAGCA CTCGGCGCTA CGGTCCGCTG GCCGGTTCGG TCAAGATCGC CGCCCGCCGT GATCCCCATT CGGTCGGACT CGTCGACGAG CGCGGATCAC TGACGTACAC ACAGCTCGAC CTGCGCTCCA ACGCTCTTGC GCGGGCATGG GCCGCACGCG GTGTGCGGCC GGGCACCACC GTCGCCGTGC TGTGCCGCGA CCACCGTGGA CTCGTCCTCG CCCTCCTTGC GGCGGGCAAA CTGGGTGCGC CCGTACTCCT GCTCAACACC GGATTCGCCA AGCCCCAGCT CACCGATGTC GCCGCCCGGG AGAAGGTACG CGTCCTCGTG CACGACGAGG AGTTCACCGA CCTGCTCGGC GACATCGCGG GAGTCGACCG GTACCTCGCG TGGACGGACT CCACCCCGCC CGCCGACGTG CCGACGCTCG ACGACATCAT CGCGGGCAGC GACGACCATC CGCTTCCGGC CCCACCGAAA CCCGGTGGTC TCGTGCTGCT CACCAGCGGC ACCACCGGAA CACCGAAAGG CGCTCCTCGG CCGAAGGTCT CGCCGTTCGA CTCCGCCCAG TTCCTCGATC GCATCCCACT GCGTGTCGGT GAGGCCACCT TCATGGGCGC CCCACTGTTC CACGCCACCG GGATCTCCCA GTTCATCTTG TCGTGCGCGC TCGGCTGCAC CGTGGTGGTG CGGAGGAAAT TCGACCCCGA GGCCACCTTG CGCGGGGTCG CCGAGCATCG GTGTACGGCG TTGGTGCTGG TGCCCACGAT GCTGCAGCGC ATTCTCGACC TCGGGCCTGA GGTGATCGGA CGGTACGACA CCTCGAGTCT GCGCATCATC TTCGTCGCGG GGTCCGCGCT TGCGCCCGAG GTCGGCAACC GGGCCACGGA ACTCTTCGGA GACGTGATCC ACAATTTGTA CGGTTCCACG GAGGTCGCCG TCGCGACCGT GGCCACGCCG GAGGATTGGA AGCGAGCGCC AGGCACGGTG GGCAAACCCC CGGTCGGTTG CCGGGTCGAG CTCTACGACG AGCACGGTCG GCGCATCACC AGGCCGTACG TCACGGGAAG GGTGTTCGTC GGCAGTGGAC TCGCGTTCGA GGGGTACACC GACGGCAGGA CCAAGGAGAC GATCAACGGC CTGCTCGCCA CCGGCGACGT CGGTCATTTC GACGCCGACG GGCTGCTGTT CATCGACGGC CGGGACGACG AGATGATCGT CTCGGGTGGG GAGAACGTCT ATCCCGTCGA GGTGGAGAAC GTGCTCGTCG AGCATCCCGA CGTGCGGGAG GCCGCGGTGA TCGGAGTGCC CGACGACGAG TTCGGTCAGC GGCTCAAGGC GTTCGTCGTG GTCAAGGAGG GGGCCGAGTT GGACGCCGAC GCCGTACGGG AGCACGTGAG GAACAATCTG GCCCGGTACA AGGTCCCGCG GGATGTCGAG TTCCTGGACC AGCTCCCACG TAACGCCACC GGCAAAGTCC TGCGCAACAG TCTTGAGTAG
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Protein sequence | MGRPTVAGVM SRAVEAVRSL AVLYRAGLAP IPRLDEGIRS IISTRRYGPL AGSVKIAARR DPHSVGLVDE RGSLTYTQLD LRSNALARAW AARGVRPGTT VAVLCRDHRG LVLALLAAGK LGAPVLLLNT GFAKPQLTDV AAREKVRVLV HDEEFTDLLG DIAGVDRYLA WTDSTPPADV PTLDDIIAGS DDHPLPAPPK PGGLVLLTSG TTGTPKGAPR PKVSPFDSAQ FLDRIPLRVG EATFMGAPLF HATGISQFIL SCALGCTVVV RRKFDPEATL RGVAEHRCTA LVLVPTMLQR ILDLGPEVIG RYDTSSLRII FVAGSALAPE VGNRATELFG DVIHNLYGST EVAVATVATP EDWKRAPGTV GKPPVGCRVE LYDEHGRRIT RPYVTGRVFV GSGLAFEGYT DGRTKETING LLATGDVGHF DADGLLFIDG RDDEMIVSGG ENVYPVEVEN VLVEHPDVRE AAVIGVPDDE FGQRLKAFVV VKEGAELDAD AVREHVRNNL ARYKVPRDVE FLDQLPRNAT GKVLRNSLE
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