Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_13360 |
Symbol | |
ID | 8386672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1375734 |
End bp | 1376396 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644975420 |
Product | predicted O-methyltransferase |
Protein accession | YP_003133210 |
Protein GI | 257055378 |
COG category | [R] General function prediction only |
COG ID | [COG4122] Predicted O-methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.693653 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGG ACCGATGGAC AGCGGTCGAC GAGTACTTCC AGGAGCAACT CGCCCCGCAC GACGATGTTC TCGACGCCAC GCAGCAGGCG TGTGCGCAGG CCGGTCTTCC CGACATCGCG GTAGCCCCCA ACCAGGGCAA GCTGTTGCAG TTGCTCGCGC GCATGATCGA TGCCCGCACG ATCCTGGAGA TCGGCACGCT CGGCGGCTAC TCCACCATCT GGCTCGCTCG AGCCCTACCT GACCAGGGAC GGCTCATCAC GCTCGAAGCC GACGCCACCC ACGCGGACGT GGCCAAGAGC AACATCGAGC GGGCCGGCCT GTCCGACCGG GTGGACGTCC GTGTCGGCCG AGCACTGGAC ATCCTCCCCA CACTGCGGGA CGAAGGACCG TTCGACCTGG CGTTCATCGA CGCGGACAAG GTCAACAACC CGCACTACGT CCGCTGGGCG TTGGAGCTCG GCAGGCCGGG CAGTGTGATC GTGGTGGACA ACGTCGTCCG CGGCGGTGCG GTGATCGACA CCGGCAACGA CGACCCATCG GTCCGCGGGA CGCGGGAGAC CGTCGAACTC CTGCGCGCCG AGCCCCGTCT CGACGCCACC GCACTGCAGA CCGTGGGAGG CAAGGGCTAC GACGGCATCA TCATCGCCCG TGTCGTCTCC TGA
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Protein sequence | MKQDRWTAVD EYFQEQLAPH DDVLDATQQA CAQAGLPDIA VAPNQGKLLQ LLARMIDART ILEIGTLGGY STIWLARALP DQGRLITLEA DATHADVAKS NIERAGLSDR VDVRVGRALD ILPTLRDEGP FDLAFIDADK VNNPHYVRWA LELGRPGSVI VVDNVVRGGA VIDTGNDDPS VRGTRETVEL LRAEPRLDAT ALQTVGGKGY DGIIIARVVS
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