Gene Svir_13360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_13360 
Symbol 
ID8386672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1375734 
End bp1376396 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content67% 
IMG OID644975420 
Productpredicted O-methyltransferase 
Protein accessionYP_003133210 
Protein GI257055378 
COG category[R] General function prediction only 
COG ID[COG4122] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.693653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGG ACCGATGGAC AGCGGTCGAC GAGTACTTCC AGGAGCAACT CGCCCCGCAC 
GACGATGTTC TCGACGCCAC GCAGCAGGCG TGTGCGCAGG CCGGTCTTCC CGACATCGCG
GTAGCCCCCA ACCAGGGCAA GCTGTTGCAG TTGCTCGCGC GCATGATCGA TGCCCGCACG
ATCCTGGAGA TCGGCACGCT CGGCGGCTAC TCCACCATCT GGCTCGCTCG AGCCCTACCT
GACCAGGGAC GGCTCATCAC GCTCGAAGCC GACGCCACCC ACGCGGACGT GGCCAAGAGC
AACATCGAGC GGGCCGGCCT GTCCGACCGG GTGGACGTCC GTGTCGGCCG AGCACTGGAC
ATCCTCCCCA CACTGCGGGA CGAAGGACCG TTCGACCTGG CGTTCATCGA CGCGGACAAG
GTCAACAACC CGCACTACGT CCGCTGGGCG TTGGAGCTCG GCAGGCCGGG CAGTGTGATC
GTGGTGGACA ACGTCGTCCG CGGCGGTGCG GTGATCGACA CCGGCAACGA CGACCCATCG
GTCCGCGGGA CGCGGGAGAC CGTCGAACTC CTGCGCGCCG AGCCCCGTCT CGACGCCACC
GCACTGCAGA CCGTGGGAGG CAAGGGCTAC GACGGCATCA TCATCGCCCG TGTCGTCTCC
TGA
 
Protein sequence
MKQDRWTAVD EYFQEQLAPH DDVLDATQQA CAQAGLPDIA VAPNQGKLLQ LLARMIDART 
ILEIGTLGGY STIWLARALP DQGRLITLEA DATHADVAKS NIERAGLSDR VDVRVGRALD
ILPTLRDEGP FDLAFIDADK VNNPHYVRWA LELGRPGSVI VVDNVVRGGA VIDTGNDDPS
VRGTRETVEL LRAEPRLDAT ALQTVGGKGY DGIIIARVVS