Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_13350 |
Symbol | |
ID | 8386671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1374268 |
End bp | 1375539 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644975419 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_003133209 |
Protein GI | 257055377 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTCGT TCGACGCCGA CCTAGCCGCC GTGGACCCGG AGGTCGCTGA GGCGGTGGCG GCCGAGCTGA ACCGACAGCA GTCGACGCTG GAGATGATTG CGTCGGAGAA CTTCGCGCCC GCCAGTGTGC TGGAGGCGCA GGGCTCGGTG TTGACCAACA AGTACGCCGA GGGTTACCCG GGACGGCGCT ACTACGGCGG CTGCGAACAC GTCGATGTCA TCGAAACCCT TGCCATCGAG CGAGCCAAGG CCCTGTTCGG CGCTGAGCAT GCGAACGTGC AGCCGCATTC CGGTGCGCAG GCCAACGCCG CCGCCATGAC GGCCCTGTTG GAGCCCGGTG ACACCATCCT GGGACTCGAC CTGGCCCACG GTGGACACCT CACCCACGGC ATGAAGATCA ACTTCTCCGG CAGGCTCTAC AACGTGGTCG CCTACCACGT CGACCGGGAG ACCGGCCGGA TCGACATGGC CGAGGTCGAG CGGCTGGCCA CCGAACACAA GCCCAAACTG ATCATCGCGG GTTGGTCGGC GTATCCCCGG CAGCTCGATT TCGCCGAGTT CCGACGCATC GCCGACTCGG TAGGCGCCAA GCTCATGGTG GACATGGCCC ACTTCGCCGG TCTCGTGGCG GCCGGGCTGC ACCCGAACCC CGTGCCGTAC GCCGACGTCG TGACCACCAC CACGCACAAG ACGTTGGGCG GACCACGCGG CGGCATCATC CTGTCGAAGC AGGAGTACGC CAAGAAGATC AATTCGGCGG TGTTCCCGGG GCAGCAGGGT GGGCCGTTGG AGCACGTCAT CGCGGCCAAG GCCGTGGCGC TGAAGATCGC CGCCAGCGAG GAGTTCCGGG AGCGGCAGCA GCGGGTGCTC GAGGGCGCGA AGATCCTCGC CGAGCGGTTG TCGGCGTCCG ACTGCGCCTC CGCGGGAGTA CGGGTACTCA CCGGGGGCAC CGACGTGCAC CTGGTGCTCG TGGATCTTGT GAACTCGGAA CTGGACGGCA AGCAGGCCGA GGACCGGCTG CACGACATCG GCATCACGGT GAACCGCAAC GCCGTCCCCT TCGACCCGCG TCCGCCGATG GTGACCTCGG GGTTGCGGAT CGGTACCCCG GCGTTGGCCA CACGTGGTTT CGGCGCCGAG GACTTCACCG AGGTCGCCGA CATCATCGCC CGCGCGTTGC AGCCGAACGC CGACAGCGCG GTCCTGGAGG ACCTGCGTTC CCGCGTGGCG GTGCTGGCGA AGAAGCACCC GCTCTACGCG AACAAGAACT GA
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Protein sequence | MNSFDADLAA VDPEVAEAVA AELNRQQSTL EMIASENFAP ASVLEAQGSV LTNKYAEGYP GRRYYGGCEH VDVIETLAIE RAKALFGAEH ANVQPHSGAQ ANAAAMTALL EPGDTILGLD LAHGGHLTHG MKINFSGRLY NVVAYHVDRE TGRIDMAEVE RLATEHKPKL IIAGWSAYPR QLDFAEFRRI ADSVGAKLMV DMAHFAGLVA AGLHPNPVPY ADVVTTTTHK TLGGPRGGII LSKQEYAKKI NSAVFPGQQG GPLEHVIAAK AVALKIAASE EFRERQQRVL EGAKILAERL SASDCASAGV RVLTGGTDVH LVLVDLVNSE LDGKQAEDRL HDIGITVNRN AVPFDPRPPM VTSGLRIGTP ALATRGFGAE DFTEVADIIA RALQPNADSA VLEDLRSRVA VLAKKHPLYA NKN
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