| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_13220 |
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| Symbol | |
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| ID | 8386658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 1358274 |
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| End bp | 1359200 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644975406 |
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| Product | ABC-type dipeptide/oligopeptide/nickel transport system, permease component |
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| Protein accession | YP_003133196 |
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| Protein GI | 257055364 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.444748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGATCACCT ACATCGCACG CCGACTAGGG CAGTCGGTGT TTCTCATCTT CGGCGCGATC
ACCATCGTGT TCTTGGTGCT CCGCGTCATC CCGGGTGACC CGGCAGCACT CATGTTGGGC
AGCCAGGCCA CCGAGGAAGA ACTCGCCGCG GCACGGCAAC AGCTGGGACT CGACGACCCG
CTGTGGCAGC AGTACGTGCG TCACCTCGGC GAAGTGGTGA CGCTCGACTT CGGTGAATCC
TGGCGACTCG GCGGTGATGC GCTGGGCAAC GTCCTGGACC GACTGCCCGC CACCGTGACA
CTCGCCGGAT ACGCACTGCT GTTCACCCTG CTGCTCGGTT TCCCGCTCGG TGTCTACGCC
GCGCGGCACG AGGGCAAACT CGTCGACCGA CTCGTCTCCT ACCTGTCATT GGCGGGCCAG
GCGCTGCCGT CGTTCTGGGT CGGCCTCATG CTGGTGCTCA TCTTCGCCCG GATCTTGGGC
GTCCTCCCGG GCACCGCGAA CGGCACCCCG GCCTCGGTGA TCCTGCCCGC GTTCACTCTG
GCCCTGCCGT TTCTGGGTTG GCTCGCACGG TTGGTGCGCA ACGGCACGTT GGAGGAACTG
GGCAAGGAGT ACGTCCGCAC CGCGCGGTCC AAAGGCCTTT CGGAGCGGGT CGTCTTCAAC
GTTCACGTAT TACGGAACAC GCTGACGCCG GTGGTCACCG TACTCGGCCT GGTACTGGGT
AACTTCATCG CCGACGCTGT GATCATCGAG CAGGTGTTCG CGTGGCCGGG CATCGGCACG
CTGATGATCG ACTCGATCAT CCACCGCGAC TACGCCGTGG CCGAAGCGGC GATCGTGCTC
ATCGCGGTGT TCTACATCCT CCTGAACCTG CTGGTGGACG TCCTGTACTT CTACCTCGAT
CCGAGAATCA CCTTGGAGAC CGTATGA
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| Protein sequence | MITYIARRLG QSVFLIFGAI TIVFLVLRVI PGDPAALMLG SQATEEELAA ARQQLGLDDP
LWQQYVRHLG EVVTLDFGES WRLGGDALGN VLDRLPATVT LAGYALLFTL LLGFPLGVYA
ARHEGKLVDR LVSYLSLAGQ ALPSFWVGLM LVLIFARILG VLPGTANGTP ASVILPAFTL
ALPFLGWLAR LVRNGTLEEL GKEYVRTARS KGLSERVVFN VHVLRNTLTP VVTVLGLVLG
NFIADAVIIE QVFAWPGIGT LMIDSIIHRD YAVAEAAIVL IAVFYILLNL LVDVLYFYLD
PRITLETV
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