Gene Svir_13140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_13140 
Symbol 
ID8386650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1351546 
End bp1352334 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content69% 
IMG OID644975398 
Producthypothetical protein 
Protein accessionYP_003133188 
Protein GI257055356 
COG category[S] Function unknown 
COG ID[COG3427] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGACTCG ACCACGAATT CACCGTCCCG GCGCCTGTTG ACGAGGTGTG GCAGGCGGTG 
CTCGACCCGG AGCGGGTCGC GCCCTGCATG CCCGGAGCCA CCCTCACGTC CGTGGAGGGA
GACAAGTTCA AGGGCACGGT GAAGGTCAAG CTCGGGCCGG TTTCCCTGCT GTACAAGGGA
TCGGGCGAGT TCCTGGAGAA GAACGCCGAG GAACGGAAGA TCGTCATCAA GGCGTCCGGC
AAGGATGCGC GTGGGGCGGG AACGGCGGCC GCCACCGTCA CGGTCACGCT CACGGCGGAG
GGTGGGTCCA CCAAGGGGGC GGTGGCCACC GACCTCAACG TCACCGGTAA GCCGGCCCAG
TTCGGCAGGG GCATGATCTC CGAGGTCGGG GGCAAGATCC TCGACAGTTT CGCCGCGAAC
CTCGCCGACA TGCTCGGTGC GGCGAGCTCC GTGGACAAAA GCGCGGCCGG TGCGGCGAAG
TCCTCGGGAA CCGCCGCGAA GAAGCAGGAC ACGACACCGG GCCGGTCGGC GGGCACACAG
GGCGCGGCCA AGACGAGTGC CGAGGAGAAG ACCGCGGCCG GCTCGACCAC CACGGCCGAG
CGGCCGGAGC GGCCGAAGTT GGAGAGCGTC AAGCCCACGG CGGCCACGCA GCCACGGGAA
GCCGAAGCGA TCGACCTGCT CGACTACGCG GGAGAGTCCC TGGCGAAGCG TTTGACTCCC
GTGCTGGCGG GGCTGGCGGC GTTGTTCGCG TTCCTCGTCG TGAGGAGGAT TCTGCGTCGC
CGAGGCTGA
 
Protein sequence
MRLDHEFTVP APVDEVWQAV LDPERVAPCM PGATLTSVEG DKFKGTVKVK LGPVSLLYKG 
SGEFLEKNAE ERKIVIKASG KDARGAGTAA ATVTVTLTAE GGSTKGAVAT DLNVTGKPAQ
FGRGMISEVG GKILDSFAAN LADMLGAASS VDKSAAGAAK SSGTAAKKQD TTPGRSAGTQ
GAAKTSAEEK TAAGSTTTAE RPERPKLESV KPTAATQPRE AEAIDLLDYA GESLAKRLTP
VLAGLAALFA FLVVRRILRR RG