Gene Svir_13090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_13090 
Symbol 
ID8386645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1344910 
End bp1346097 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content70% 
IMG OID644975393 
Productprotein containing von Willebrand factor type A (vWA) domain protein 
Protein accessionYP_003133183 
Protein GI257055351 
COG category[R] General function prediction only 
COG ID[COG3552] Protein containing von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCGGCC GCGTCCACCC GAAATCGATC ATGGTTCCCG ATTTCGGGTT CGGGGAGCAC 
AATGGGGGCA TGAGCACGCC AGCCCGGGGC GATGACGTCC TGCCCGGCCT CGTCGGCTTC
GCCGCCGCGT TGCGGGAGGC CGGTTTGCGC TGCGACGCCC ACCGCGTGCA GGCCTATCTC
GCCGCGGTCG AGCAGGTGGA CATCGGGGAC CCACGCCAGC TGTACTGGGC GGGCAGGGTC
ACGCTGTGCT CGGAGCCCGA CGATCTGCCG CGTTACGACG AAGCGTTCGC GGCGTGGTTC
TCCGGCGAGT CCCCGGTGCG GCGGCGTCCC ACCCTGCCCG TGTCCGTCCA ACCCCGGATC
GCCGCTTTGG CGGCGGAATC GACCACGGGT GAGAACACCG CTGACGACGA GCGGCTCAGT
GTGGCGGCCA GCGAGGCCGA GGTGCTGCGC GAGCGTGATC TCGCCGAACT CACCTCCGCC
GAACGCAGGC ATCTTCGGGA GTTGATGGCC AAACTGCGTC CGGTGCCCGC GGTCCGCCCG
TCGCTGCGGT ACCGTCCGGC CCGGCGTGGC CGACTCGACG CGCGTCGCAC GCTGCGGGCG
ATGTTGGCCG ACGGTGGGGA GCCGAGTCGG CTGGTTCGTT CCCGCCGGCG TACCCGGCCG
CGTAAGGCCG TGCTGCTGGT CGACGTGTCC GGGTCGATGA AGCCGTACGC GGACTCGTTG
CTGCGGTTCG CCCACGTCGT GGTGCGTGGT GCGCCGTCGG ACGTGGAGGT GTTCACCCTC
GGCACCCGGT TGACCCGCGT GACCCGGCAG CTGCGACAAC GCGACCCCGA GCGGGCGATG
CTCGACGCGG GCAGGGCGGT GGCCGACTTC GCCGGGGGAA CGCGGCTGGG CGAGACACTG
CGGGTGTTCC TCGACCGCTG GGGACAGCGG GGCATGGCCA GACGCGCCAC CGTCGTGATC
TTCTCCGACG GCTGGGAACG CGGTGACGCG AGTCTGCTCG GGGAGCAGGT CGCGCGGCTG
CGGCGGCTCG CCCACCGGGT GTTCTGGGTC AATCCACATG CGGGACACGC GGGATACGAG
CCCGTGCAGT CCGGCATCAC GGCTGTGTTG CCCTATGTGG ACCGACTGCT AGCGGGGCAC
AGTCTGGCCA CATTGGAACG ACTGCTGAGG GAGATCGCTC ATGCATGA
 
Protein sequence
MIGRVHPKSI MVPDFGFGEH NGGMSTPARG DDVLPGLVGF AAALREAGLR CDAHRVQAYL 
AAVEQVDIGD PRQLYWAGRV TLCSEPDDLP RYDEAFAAWF SGESPVRRRP TLPVSVQPRI
AALAAESTTG ENTADDERLS VAASEAEVLR ERDLAELTSA ERRHLRELMA KLRPVPAVRP
SLRYRPARRG RLDARRTLRA MLADGGEPSR LVRSRRRTRP RKAVLLVDVS GSMKPYADSL
LRFAHVVVRG APSDVEVFTL GTRLTRVTRQ LRQRDPERAM LDAGRAVADF AGGTRLGETL
RVFLDRWGQR GMARRATVVI FSDGWERGDA SLLGEQVARL RRLAHRVFWV NPHAGHAGYE
PVQSGITAVL PYVDRLLAGH SLATLERLLR EIAHA