Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_12580 |
Symbol | |
ID | 8386595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1299676 |
End bp | 1300530 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644975344 |
Product | degV family protein |
Protein accession | YP_003133134 |
Protein GI | 257055302 |
COG category | [S] Function unknown |
COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGGTCG CGGTTGTCAC GGATTCCACA GCTCATCTGC CCGAGGGTTT CGCCGAGAGG TACGGCATCC GGGTCGTTCC TCTGCATGTC CTCGTCGACG GTGTCGCCTC GCTCGACGGT GTCGAGATCG GTCCGACGGC GCTCGCGCGA GCGTTGGGGG AGCGCAGGAT CGTCACCACG TCCAGACCCA CACCGGCTGA GTTCGCTTCG GTGTTCAGGC AGGCTTTGGC GGAGGGGGCC GACGCGATCG TGTCGGTGCA CCTGTCCAAG AAACTGTCCG GTACGTGGGA GGCCGCCGTG CTCGCGGCGC AGGAAGTGGG TCCGGACGTG GTGCGCGTGG TCGATTCCCG CGGTATCGCG ATGGGATTGG GGTTCGCCGC GTTGCGAGCC GCCGAGGCGG CGCATCGAGG AGCGTCGGTC GAGGAGGTGG AGCGGGTCGC CGTGGAGACC GCCGAACGTT CCGAGACGTT GTTCGTCGTG GAAACCCTGG AGCATCTGAG GCGGGGCGGT CGTATCGGCC ATGCCGCGGC GTTGTTGGGC ACGGCGCTCG CGGTGAAGCC TGTGCTGCGC ATGGTCGACG GTGAGATACG CCCGTTGGAG AAGGTGCGCA CGATGCAGCG GGCCATGAAC CGGCTGGTGG AGCTCGTCGC GGAGGCGGCA GGGGACGGCG AGGTGTCGCT GGCCGTCCAT CATCTGGCCT CACCCGATCG TGCGGCCGAA CTCGCCACGC GGCTCGACGA GCGGTTGGGG AAGTCGTCCG GGTGTGTGGT GTCCGAGCTC GGGGCCGTGG TCGGGGCGCA CACCGGCCCG GGGGTGCTCG GAGTCGTGGT ACAGCGTCCG ACTCCTATGG GATGA
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Protein sequence | MPVAVVTDST AHLPEGFAER YGIRVVPLHV LVDGVASLDG VEIGPTALAR ALGERRIVTT SRPTPAEFAS VFRQALAEGA DAIVSVHLSK KLSGTWEAAV LAAQEVGPDV VRVVDSRGIA MGLGFAALRA AEAAHRGASV EEVERVAVET AERSETLFVV ETLEHLRRGG RIGHAAALLG TALAVKPVLR MVDGEIRPLE KVRTMQRAMN RLVELVAEAA GDGEVSLAVH HLASPDRAAE LATRLDERLG KSSGCVVSEL GAVVGAHTGP GVLGVVVQRP TPMG
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