Gene Svir_12560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_12560 
Symbol 
ID8386593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand+ 
Start bp1298272 
End bp1298883 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content68% 
IMG OID644975342 
Productfructose-2,6-bisphosphatase 
Protein accessionYP_003133132 
Protein GI257055300 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.834883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACTGC GACGACTCGT ACTGTGGCGA CACGGTGAGA CCGACTACAA CGCGGCCGGG 
CGGATGCAAG GTCAGCTCGA CTCGAAGTTG ACCGAGGTCG GATGGAAGCA GGCGAAGTTC 
GCCGCACCCG CATTGGCCCG GTTCACCCCG GATCTCGTCG TCGCCTCCGA CCTGCGCCGA 
GCCACCGACA CCGCCACCGT GTTGACGGAG GCGTTCGAAC TGCCCCTGCG GTTGGACAAG 
CGGCTGCGTG AGACGCATCT GGGCGAATGG CAGGGCCTCA CGGGCGCCGA CGTGGACGAG 
AGGCACCCGG GCGGGCGGGA GCGCTGGCGG CTGGACGCCA CGTGGGCGCC ACCCGGTGGT 
GAGTCGCGGC TGGAGGTCGC CGAGCGGGCC TACGAGGTGG TGGCCGACCT GCTGAACGGC 
GAGGAACGGG TCGAGACCGT GCTCTTCGTC GCGCATGGCG GATTGATCCT CGCCCTGACC 
GCGAAACTGC TGCGGCTGCC CATCGGACTG TGGCCCTCAC TCGGGGGTAT CTCCAACTGT 
CACTGGGTGG ATCTGACGCG GCAGGACGGT ACCTGGCGGC TGCGTGCCTA CAACGCGGGG 
ATCATCGGGT GA
 
Protein sequence
MTLRRLVLWR HGETDYNAAG RMQGQLDSKL TEVGWKQAKF AAPALARFTP DLVVASDLRR 
ATDTATVLTE AFELPLRLDK RLRETHLGEW QGLTGADVDE RHPGGRERWR LDATWAPPGG 
ESRLEVAERA YEVVADLLNG EERVETVLFV AHGGLILALT AKLLRLPIGL WPSLGGISNC 
HWVDLTRQDG TWRLRAYNAG IIG