Gene Svir_12550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_12550 
Symbol 
ID8386592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1297868 
End bp1298275 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content67% 
IMG OID644975341 
Productiojap-related protein 
Protein accessionYP_003133131 
Protein GI257055299 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.679587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGCGA CGGCCGAAGC CTTAGACCTC GCGACCGCGG CCGCGCGTGC GGCCGCGGAC 
AAGAAGGCGA CCGACGTGGT GCTGATCGAC GTCTCGGAGC GTCTTGTGAT CACCGACGTC
TTCGTGATCG CGTCGGCGCC CAACGAACGT CAGGTCGGCG CCATCGTCGA CAACATCGAG
GAAAAGCTTC GCAAGGCCGG GCACAGGCCG GTGCGCAGGG AGGGCACCAG GGAAGGGCGC
TGGGTGCTCA TCGACTACAC CGACGTCGTG GTGCACGTCC AACACGACGA GGAGCGCGCC
TTCTACGGTC TTGAGCGGCT GTGGAAGGAC TGTCCCCGGA TCGAGGTCGA GGGGCTGGAA
GCCCCGGCCG AGGACGCGGA CGGTGACGAG GAAACGGACG TGTCGTGA
 
Protein sequence
MAATAEALDL ATAAARAAAD KKATDVVLID VSERLVITDV FVIASAPNER QVGAIVDNIE 
EKLRKAGHRP VRREGTREGR WVLIDYTDVV VHVQHDEERA FYGLERLWKD CPRIEVEGLE
APAEDADGDE ETDVS