Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_12550 |
Symbol | |
ID | 8386592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1297868 |
End bp | 1298275 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644975341 |
Product | iojap-related protein |
Protein accession | YP_003133131 |
Protein GI | 257055299 |
COG category | [S] Function unknown |
COG ID | [COG0799] Uncharacterized homolog of plant Iojap protein |
TIGRFAM ID | [TIGR00090] iojap-like ribosome-associated protein |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.679587 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAGCGA CGGCCGAAGC CTTAGACCTC GCGACCGCGG CCGCGCGTGC GGCCGCGGAC AAGAAGGCGA CCGACGTGGT GCTGATCGAC GTCTCGGAGC GTCTTGTGAT CACCGACGTC TTCGTGATCG CGTCGGCGCC CAACGAACGT CAGGTCGGCG CCATCGTCGA CAACATCGAG GAAAAGCTTC GCAAGGCCGG GCACAGGCCG GTGCGCAGGG AGGGCACCAG GGAAGGGCGC TGGGTGCTCA TCGACTACAC CGACGTCGTG GTGCACGTCC AACACGACGA GGAGCGCGCC TTCTACGGTC TTGAGCGGCT GTGGAAGGAC TGTCCCCGGA TCGAGGTCGA GGGGCTGGAA GCCCCGGCCG AGGACGCGGA CGGTGACGAG GAAACGGACG TGTCGTGA
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Protein sequence | MAATAEALDL ATAAARAAAD KKATDVVLID VSERLVITDV FVIASAPNER QVGAIVDNIE EKLRKAGHRP VRREGTREGR WVLIDYTDVV VHVQHDEERA FYGLERLWKD CPRIEVEGLE APAEDADGDE ETDVS
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