| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_12300 |
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| Symbol | |
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| ID | 8386567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1267893 |
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| End bp | 1268822 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644975316 |
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| Product | monosaccharide ABC transporter membrane protein |
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| Protein accession | YP_003133106 |
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| Protein GI | 257055274 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00275786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.739873 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCGGGG TCTACGGGGC TCTGCTTCTC GTCGTGATCG TCGGGAGCGT GCTGGTGTCC
CTCCGCGGCG GAGTGTTGCT CGACCAGGGT GGGATCTCGA ACATCCTCGT CCGCAGCACG
GCTCTCGGGT TGGTCGCCAT AGGACAGACG ATGGTGATCC TCGCTGGGAA GTTGGACCTG
TCGGTGGCTT ACCTGGTGGG GCTTTCGTCG TTGATCGCGG CGGAGACGAT GGCCGGCGAC
CCGGCGATGA TCGGGCCCGC GGTGGCGTTG ACGATCGTGT GTGCGGCCGG GGTGGGTCTG
GTCAACGGAC TGGTGGTCAC GCGTCTCAAG GTGAACGCGT TCATCGCGAC GTTGGGCACC
GGGCTCGTCA TTCGCGGCTA CCTGGAGGAC TCCTACGACG GTCCGGCGGG GAACGTGCCC
ACGGCGTTCC AGCATCTTGG CTACGACCGG ATCGGGCCGG TCCCGGTGTC GACCGTGCTG
ATGCTCGGAC TCGCGGTCCT GGCCTGGTGG TTCTTGACGC GGACACGTCC CGGCTACCAC
GTCTACGCAG TGGGGGGAGG CGAGGAGGTC GCCCGGTTCT CGGGCATCCG CACCGAACGG
ATCGTGGTGC TGGCGCACGT GTTGTGTTCG GTGGCCGCCG GACTGGCCGG GTTGTTCCTC
GCCAGCAGGC TCGGGGCGGG AGCCCCGTGG GTGGGCACGG ACGGGGGATA CGACCTGGAG
TCCATCGCGG CGGTGGTGTT GGGTGGCACG ATCCTCGCCG GAGGTCGGGG TGGTGTGGCC
GGCACGATCG GCGGCGTCCT CATCCTCGCG ACCCTCGACA CGATCTTCGA CGAGTTGGGT
GTCGATTCGT TCTTCAAGGA CGTGGTCCGT GGAGTCGTAC TGATCGCGGC CGTCGCGTTG
TACGCCCGGA GCAGGAGGGC CGGGCGATGA
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| Protein sequence | MVGVYGALLL VVIVGSVLVS LRGGVLLDQG GISNILVRST ALGLVAIGQT MVILAGKLDL
SVAYLVGLSS LIAAETMAGD PAMIGPAVAL TIVCAAGVGL VNGLVVTRLK VNAFIATLGT
GLVIRGYLED SYDGPAGNVP TAFQHLGYDR IGPVPVSTVL MLGLAVLAWW FLTRTRPGYH
VYAVGGGEEV ARFSGIRTER IVVLAHVLCS VAAGLAGLFL ASRLGAGAPW VGTDGGYDLE
SIAAVVLGGT ILAGGRGGVA GTIGGVLILA TLDTIFDELG VDSFFKDVVR GVVLIAAVAL
YARSRRAGR
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