Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_12280 |
Symbol | |
ID | 8386565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1266200 |
End bp | 1267717 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644975314 |
Product | monosaccharide ABC transporter ATP-binding protein |
Protein accession | YP_003133104 |
Protein GI | 257055272 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.171798 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.428152 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTGA CGCGCCTCAC TGCACAGGAG CCGATCGTCC GGATGCGGGG GATCACCAAG CGGTTCCTGG GGAACACGGT CCTCCAGGGG GTGGACCTCG ACCTGTACGC CGGTGAGGTG CACGCACTCG TGGGGGAGAA CGGTGCGGGC AAGTCGACGT TGATGAGGAT CCTGGCCGGA GTCCACACCG CCGACGAGGG GCGCGTGGAA CTCGACGGGC GTCCGGTGTC GTTCTCGGCG CCCAGGCAGG CGCAGGCCGC GGGTATCTCC ATCGTGCATC AGGAGCTCAA CCTGCTCGGT GATCGAACGG TGGCCGAGAA CGTGTTCCTC GGCTCGGAGC CCGTGCGCTA CGGCAGGGTC GACCGGCGAC GCATGGAATC GGACACCGTG GCGTTGCTGG AGGAACTCGG CGTCGTGGGA ATCTCCCCAC GAACCCTCGT GCGACGTTTG TCGGTCGCCC AGCGACAGGT CGTGGAGATC GCCAAGGCGC TGTCGAGCGA CGTCCGGGTG CTGGCGATGG ACGAGCCCAC CGCCGCGTTG GCCGACAACG AGGTGGAACT GCTGTACAGG CTCGTGCGGC GGTTGTGTGA TCACGGTATC GCCGTGCTCT ACGTCTCCCA CCGCTTGGTG GAGGTGTTCG CGCTCAGTCA CCGCATCACC GTGCTCAAGG ACGGCATGCT GGTCATCTCC CGACCGAGCG GGGGACTGAC CGGCGACGAA CTCGTCCGGC ACATGGTGGG ACGTTCGTTC GAGGCGTTGT TCCCGCCCCG GGCGAAGGAT TCGGAGCTCG GTGCGACGCG GTTACGGCTG TCCGGATGCG GTAACGAGAA ACTGCGCGAC ATCGATCTGG AAGTACGCGC GGGCGAGATC GTCGGGCTGG CGGGTTTACA GGGCGCGGGC CGCTCGGCCA TCGCCCGCGC TGTGGGCGGC AGCGAACCGT TCACCGTCGG AACGGTCGAA GTGGACGGTG CGCCCGTGCG GTTGAGGTCG CCACGCGCGG CCGTGCGAGC CGGGATCGCG TACGTCACCG AGGACCGCAA GGGGGAGGGG TTGGCCCTGC GCCAGTCGGT GCGGGACAAC GCCTTGCTGG TGCGTCGTGC CGCTTTCGGT GGCCGATCCC GGGGTTGGTC GAGAGGGATC TCGAAGCTGC TGGAAGCGAT GACCGTGGTC GCGCGTTCAC CGGATCAGGA GGTGCGGTTC CTGTCCGGTG GGAACCAGCA GAAGGTCGTG CTCGCCAAGT GGTTGGCGGT GGAGCCCAAG GTGCTCGTCG TCGACGAACC GACCCGGGGC GTCGACGTCG GTGCCAAGCA GGCGGTGTAC GAGCTGTTGC GCGGGTTGGC CCGGTCCGGT GTGGCCATCG TGATGATCTC TTCCGAGTTA CCCGAACTGA TCGGCATGAG TGACCGCGTG TTGGTGCTGC ACGACGGTCG GATCGCGGGT GAGCTCCCCG CGGGGCCGAC GGAGGAAGCG GTGATGCGAC TGGCCACCGG CCATGTGACC CCCAAGGAGG CCGCATGA
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Protein sequence | MAVTRLTAQE PIVRMRGITK RFLGNTVLQG VDLDLYAGEV HALVGENGAG KSTLMRILAG VHTADEGRVE LDGRPVSFSA PRQAQAAGIS IVHQELNLLG DRTVAENVFL GSEPVRYGRV DRRRMESDTV ALLEELGVVG ISPRTLVRRL SVAQRQVVEI AKALSSDVRV LAMDEPTAAL ADNEVELLYR LVRRLCDHGI AVLYVSHRLV EVFALSHRIT VLKDGMLVIS RPSGGLTGDE LVRHMVGRSF EALFPPRAKD SELGATRLRL SGCGNEKLRD IDLEVRAGEI VGLAGLQGAG RSAIARAVGG SEPFTVGTVE VDGAPVRLRS PRAAVRAGIA YVTEDRKGEG LALRQSVRDN ALLVRRAAFG GRSRGWSRGI SKLLEAMTVV ARSPDQEVRF LSGGNQQKVV LAKWLAVEPK VLVVDEPTRG VDVGAKQAVY ELLRGLARSG VAIVMISSEL PELIGMSDRV LVLHDGRIAG ELPAGPTEEA VMRLATGHVT PKEAA
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