Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_11860 |
Symbol | |
ID | 8386523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1227043 |
End bp | 1227558 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644975275 |
Product | protein of unknown function (DUF477) |
Protein accession | YP_003133067 |
Protein GI | 257055235 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.334422 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAACTG GTGAACTGAC CCAGGACAGT AAGCCCACCG GGGACGGCAA GTCCACCGGG CTCGAAGGGA CCAAGTACCA GCCGGGCGTC GCTGTGACGG CAAGTGGCCG AGTGTCGGTG GCCCAGATGT ACGAGCCCGC TACTCCATCC GGCCCCTTCA GTACGGCTCA GCTCGCCCGT CTCGACGAGG CGCTGACCCT GGCCAGCCGG GAAACGGGAC TCGACTTCAG CATCTACCTC GGTGAGCTCG GTGACGAGCC CCGGCAAAGT GCCGAGGCGC TCCACAACAC ACTCGGTGAG CGCGGTGACG ACTCCGTGTT GATCGCCGTG TCACCCGGTG AACGTGTCGT CGAGGTCGTC ACCGGTGCTC GCGCCATGCA GCGTCTGCCC GACCGGAGCG CCAAGCTCGC GGTGATGAGC ATGGTCGCCT CCTTCAAGGA AGGCGATCTC ATCGGTGGTC TCATCAGCGG CCTTCGCATG ATGGCCGACC AGGCGGGCTC CGCCCCGCGC TCCTGA
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Protein sequence | MATGELTQDS KPTGDGKSTG LEGTKYQPGV AVTASGRVSV AQMYEPATPS GPFSTAQLAR LDEALTLASR ETGLDFSIYL GELGDEPRQS AEALHNTLGE RGDDSVLIAV SPGERVVEVV TGARAMQRLP DRSAKLAVMS MVASFKEGDL IGGLISGLRM MADQAGSAPR S
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