| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_11690 |
|---|
| Symbol | |
|---|
| ID | 8386506 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 1203766 |
|---|
| End bp | 1206072 |
|---|
| Gene Length | 2307 bp |
|---|
| Protein Length | 768 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644975259 |
|---|
| Product | molybdopterin-dependent oxidoreductase alpha subunit |
|---|
| Protein accession | YP_003133052 |
|---|
| Protein GI | 257055220 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | [TIGR01701] oxidoreductase alpha (molybdopterin) subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGTAGGA AACCTCCGAT CCGGGACATC GACGAGTCGG CGCTGCAGGT CGGCGAGGCC
CAGGATCACG CGGCGGGGGT GAAGGCCGTT GCGGTGTCGA TGAAACGCGC CTACGAGCAG
ATGGGCGTGA CCCGCACGGC ACTCACGCTG CCTCTGGTCA ACCAGCGAGC CGGGTTCGAC
TGCCCCGGCT GCGCCTGGCC GGAATCCGAA GGGCGTCGCC GGCCCGCCGA GTTCTGCGAG
AACGGGGTCA AGGCCGTCGC CGAGGAGGCC ACCACACGCA AGGTGACGCG CGAGTTCTTC
GCGCGGCACT CGGTGTCGGA GCTCGCCGAG CGCACCGACT ACTGGTTGGG CCAGCAGGGA
CGGCTGACCG AGCCGATGGT GCTGCGTCCC GGCGCCGACC ACTACACCCC CATCAGTTGG
GAGGAGGCGT TCCGGCTCAT CGCCGATGAG CTGAACGCCC TCGACTCGCC CGACCAGGCC
GTGTTCTACA CCTCGGGTAG GACGAGCAAC GAGGCCGCGT TCGCCTACCA GCTGTTCGTG
CGCAGTTTCG GGACCAACAA CCTGCCCGAC TGCTCGAACA TGTGCCACGA GTCGTCGGGG
GCGGCCCTGA CGGAGACGAT CGGCATCGGT AAGGGCTCGG TGAGCCTGGA GGACATCCAC
CGCGCCGATC TCATCGTCGT GCTCGGACAG AACCCGGGCA CCAACCACCC GCGCATGCTC
TCGGCCCTGG CCGAGGCGAA ACAGCGCGGA GCGCAGATCA TCTCGGTGAA CCCGCTTCCG
GAAGCGGGAC TTTTGCGGTT CAAGGACCCC CAGACCGTGC GCGGGGTCGC CGGTCGGGGC
GCGGAGCTGA CCGATGTGTT CTGTCAGATC CGCCTCGGTG GTGACCTCGC GTTCTTCAAG
GCGATCGGGG CGCGGCTGCT CGACGCGGAG GACGCCGCAC CGGGCACCGT GCTCGACCGC
GAGTTCATCG AGCGGCACAC CCACGACTTC GAGGCCTATC GGGCGCAGGC GCGGGCCCTC
GACGAGGCGG AGATCGCCGA GGCCACCGGT CTGCCGAGCG AGTTGCTCGA CGACGTGGCG
CGGCGGTTCG CGCGGGCGGA ACGGATCGTG CTGTGTTGGG CCATGGGTCT CACCCAGCAC
AAGCACTCGG TGCCGACCAT CCGAGAGGCC GTGAACGTCA TGCTGTTGCG CGGCATGATC
GGCAAGCCGG GGGCGGGGCT GTGCCCGGTG CGGGGACACT CCAACGTGCA GGGCGACCGC
ACCATGGGCA TCTACGAGAA GATGCCCGAC AGCTTCCTCG ACGCGCTGGA CAAGGAATTC
GGCATCACCA CACCGCGTGA GCACGGGTAC GACACCGTCG AGAGCATCCG CGCGATGAGC
CGCGGGGACG CTCGCGTGTT CATCGGCATG GGCGGCAACT TCGCGCGCGC CACGCCGGAC
ACGGAGGTCA CCGAGGCGGC GTTGCGGTCG TGCTCGCTCA CCGTGCAGGT GTCGACCAAG
CTCAACCGGT CCCACGTGGC CACGGGGCGG ACGGCCCTCA TCCTGCCGAC GCTCGGCCGT
ACCGAGGTCG ACGAGCAGGC GAGCGGCAAG CAGTTCGTGA CCGTGGAGGA CTCCATGTCC
GTGGTGCACC GTTCCCGCGG ACGGTTGCGG CCGGCGAGTA AGGCGCTCCT GTCGGAGGTG
TCCATCGTCT GCCGGTTGGC CCGCGCCACG CTCGGCCCCG ACCACCCCGT GCCGTGGGAG
AAGTTCGAGG CCGACTACGA CACCATCCGC GACTCCATCG CGCGGGTCGT GCCGGGGTGC
GAGGACTACA ACGCCAAGGT GCGGCGGCCG AACGGGTTCG TGCTCCCGCA TCCGCCTCGC
GACGCCCGGG AGTTCCCCAC CGACACCGGT AAGGCGAACT TCACCGTCAA CCCCCTCTGG
TACCCGAAGG TGCCGCAGGG ACGGTTGTTG CTGCAGACGT TGCGCAGCCA CGACCAGTAC
AACACCACCA TCTACGGGTT GTCGGACCGT TACCGCGGTA TCGAGAACGG GCGGCGTGTG
GTGATGGTCA ACGCCGACGA CCTCGCCGAG CTCGGCCTGC GGGACGGGCA GCGCGTCGAC
CTGGTCAGCG AGTGGACGGA CTCGTCCGGC ACGACCACGG AGCGGCGGGC CGACGATTTC
CGCATCGTCG CCTATCCCAC GGCGCGGGGC TGTGCCGCCG CCTACTACCC GGAGACCAAC
CCGTTGGTGC CGTTGGATTC CGTTGCCGAT GTTTCGAACA CCCCGACCTC GAAGTCGGTG
GTGGTTCGCC TCGAACCGAG GAGGTAA
|
|---|
| Protein sequence | MGRKPPIRDI DESALQVGEA QDHAAGVKAV AVSMKRAYEQ MGVTRTALTL PLVNQRAGFD
CPGCAWPESE GRRRPAEFCE NGVKAVAEEA TTRKVTREFF ARHSVSELAE RTDYWLGQQG
RLTEPMVLRP GADHYTPISW EEAFRLIADE LNALDSPDQA VFYTSGRTSN EAAFAYQLFV
RSFGTNNLPD CSNMCHESSG AALTETIGIG KGSVSLEDIH RADLIVVLGQ NPGTNHPRML
SALAEAKQRG AQIISVNPLP EAGLLRFKDP QTVRGVAGRG AELTDVFCQI RLGGDLAFFK
AIGARLLDAE DAAPGTVLDR EFIERHTHDF EAYRAQARAL DEAEIAEATG LPSELLDDVA
RRFARAERIV LCWAMGLTQH KHSVPTIREA VNVMLLRGMI GKPGAGLCPV RGHSNVQGDR
TMGIYEKMPD SFLDALDKEF GITTPREHGY DTVESIRAMS RGDARVFIGM GGNFARATPD
TEVTEAALRS CSLTVQVSTK LNRSHVATGR TALILPTLGR TEVDEQASGK QFVTVEDSMS
VVHRSRGRLR PASKALLSEV SIVCRLARAT LGPDHPVPWE KFEADYDTIR DSIARVVPGC
EDYNAKVRRP NGFVLPHPPR DAREFPTDTG KANFTVNPLW YPKVPQGRLL LQTLRSHDQY
NTTIYGLSDR YRGIENGRRV VMVNADDLAE LGLRDGQRVD LVSEWTDSSG TTTERRADDF
RIVAYPTARG CAAAYYPETN PLVPLDSVAD VSNTPTSKSV VVRLEPRR
|
|---|
| |