| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_11260 |
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| Symbol | |
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| ID | 8386463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 1161613 |
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| End bp | 1163112 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644975216 |
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| Product | histidinol-phosphate phosphatase family protein |
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| Protein accession | YP_003133009 |
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| Protein GI | 257055177 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0241] Histidinol phosphatase and related phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.130521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.23358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACG CCGTCGACAA CGCCGTCTCC TACACCGTCG TCGTCCCGAC GACGGGGCGC
GACAACCTGT TCACGTTGTT GCACACGCTC GCGCACGGCC GGGGGCCCGC GCCCACCGAG
GTGCTCGTCG TGGACGACCG GCCCACATCA CACGCCCCCG AACCCCTGCC CCTGCCCGAG
CTCGGATTGC CCGTGCGGCG ACTGGTCTCG GGCGGACGGG GTCCGGCAGC GGCCCGCAAC
GTCGGCTGGC GCGCGGCGAC CACCGACTGG GTCGCCTTCC TCGACGACGA CGTGCTCCCG
AGCCAGGATT GGCCCGCCCG GCTCGTCGAC GACCTCGTCG GGCTCGACGC CGATGTCGCG
GCGTCGGTGG CCCGACTGGT CGTACCGCTG CCCGGGGACC GCAGACCCAC GGACGACGAA
CGGGACACGC TCGCCCTGAC CGAGGCACGA TGGATCACCG CCGACATGGC CTACCGACGC
CACACGCTGA TCGAGGTGGG CGGCTTCGAC GAGCGTTTCC CCCGCGCCTA CCGGGAGGAC
GCCGACCTGG CGTTGCGCGT GCGCCGCGCG GGCCGACGGA TCGTGCAGGG CGAGCGCGTC
ACCACCCATC CGCCCAAGTC CGGTGGTTTC CTCGCCAGCG TGCGCCGGCA ACGGGGCAAC
GCCGACAACG CGTTGATGCG GGCCAAACAC GGTGCCGGCT GGCGAGCGGA GGCCGGTGAG
GGCCCCGGGA GGCTCGGCAG GCACGCGCTC GCCACGGTGG CGGGCGTGTC GGCGCTGGTC
GCCCTCGCCG CGCGAGCCTC GAAGGCGGCG ACGTTGGCGG GCGGCCTGTG GGTCGGACTG
ACGACCGAAT TCGCCGTGCG TCGCATCGTC CCCGGACCGC GTACCCTCGG CGAGATGGCG
CGGATGCTGG TCACCAGCGC CATGATCCCG CCCACCGCGT GCGCCCACCG GCTGATGGGC
GAGTGGCGGG TGCGGCGTGG TCGGGCGGTG CTGTTCGACC GGGACGACAC GTTGATCGAG
GACGTCCCGT ACCTGTCCGA TCCGGAGAAG GTGCGGCCGA TGCCGAAAGC GGCCGAGGCC
GTGGCACTGC TGCGGGAAGC GGGGGTACCC GTCGGTGTGG TGAGCAACCA GTCCGGCATC
GCCCGGGGTT ACATCACACC GGAACAGCTC CGCGCAGTCA CCCATCGAGT GGACGAACTG
CTGGGTCCCT TCCAGACGTG GCAGCTGTGC CCGCACGGTC CCGACGACGG GTGCCCGTGT
CGCAAGCCGC GCCCCACCAT GGTGTTGCGG GCCGCCGAGG AACTGGGCGT GGACATCCGG
CGCTGCGTCG TCATCGGCGA CATCGGGTCC GATGTGGAGG CCGCGCTCAC GGCGGGTGCC
AAGGCCATCC TCGTGCCGAC CCCACGCACC CTGCCCCACG AGATCGAACT GGCGCGCAGG
TACGCCGTCG TGGCACCGGA TCTGCCGACG GCGGCGCGGA TCGCGTTGGG GTCGACATGA
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| Protein sequence | MSDAVDNAVS YTVVVPTTGR DNLFTLLHTL AHGRGPAPTE VLVVDDRPTS HAPEPLPLPE
LGLPVRRLVS GGRGPAAARN VGWRAATTDW VAFLDDDVLP SQDWPARLVD DLVGLDADVA
ASVARLVVPL PGDRRPTDDE RDTLALTEAR WITADMAYRR HTLIEVGGFD ERFPRAYRED
ADLALRVRRA GRRIVQGERV TTHPPKSGGF LASVRRQRGN ADNALMRAKH GAGWRAEAGE
GPGRLGRHAL ATVAGVSALV ALAARASKAA TLAGGLWVGL TTEFAVRRIV PGPRTLGEMA
RMLVTSAMIP PTACAHRLMG EWRVRRGRAV LFDRDDTLIE DVPYLSDPEK VRPMPKAAEA
VALLREAGVP VGVVSNQSGI ARGYITPEQL RAVTHRVDEL LGPFQTWQLC PHGPDDGCPC
RKPRPTMVLR AAEELGVDIR RCVVIGDIGS DVEAALTAGA KAILVPTPRT LPHEIELARR
YAVVAPDLPT AARIALGST
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