Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_11150 |
Symbol | |
ID | 8386452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1151199 |
End bp | 1152206 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644975205 |
Product | sugar phosphate isomerase/epimerase |
Protein accession | YP_003132998 |
Protein GI | 257055166 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.750375 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0940368 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGTC CGGTAACACT GTTCACCGGC CAGTGGGCCG ACATGCCGTT CGAGGAAGTG TGCCGACTCG CGTCGGAGTG GGGATACGAC GGGCTGGAGA TCGCCTGCTC GGGAGACCAC TTCGAGGTCG ACCGTGCTCT GTCCGAAGAG GACTATGTGG CGAACAAGTT GAAGCTGCTC GAATCCTACG GCCTCAAGGT GTGGGCGATC TCCAACCACC TCGTGGGGCA AGCGGTGTGC GACGATCCGA TCGACGAACG CCACCGCAAC ATCCTGCCCG CCCGGATCTG GGGTGACGGC GACCCCGAGG GGGTGCGACA GCGGGCCGCG GCCGAGATGG CCGACACCGC CAGGGCCGCC GCGAAGCTCG GTGTGGACAC CGTCATCGGT TTCACCGGCT CCAAGATCTG GAAGTACGTG GCGATGTTCC CGCCCGTGAC CGCCGAGATG ATCGACGACG GGTACGCCGA CTTCGCACGC CGTTGGAACC CGATCCTCGA CGTCTTCGAC GAGGTGGGTG TGCGCTTCGC CCACGAGGTG CACCCGAGCG AGATCGCCTA CGACTACTGG ACCACCAAAC GGACGCTGGA GGCGATCGAC CACCGGCCCG CGTTCGGGTT GAACTGGGAC CCGTCGCACT TCGTGTGGCA GGACCTCGAC CCCGTCGGGT TCATCCTGGA CTTCGCCGAC CGCATCTACC ACGTGGACTG CAAGGACACG AAGAAGCGGT TCGACGGCCG CAACGGCAGG CTCGGCTCGC ACCTGCCGTG GGCCGATCCG CGCCGTGGCT GGGACTTCGT GTCCACCGGG CACGGCGACG TGGACTGGGA GAGCGCGTTC AGGGCCCTGA ACGCCATCGG CTACACCGGG CCGATCTCGG TGGAGTGGGA GGACGCGGGC ATGGACCGCT TGCGGGGAGC CGCCGAAGCC GTCACCTACA TCCGCAGTCT GTTGTTCGAC AAGCCCGAAG CAGCCTTCGA CGCCGCGTTC AGCACGGAGA GGAACTGA
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Protein sequence | MSRPVTLFTG QWADMPFEEV CRLASEWGYD GLEIACSGDH FEVDRALSEE DYVANKLKLL ESYGLKVWAI SNHLVGQAVC DDPIDERHRN ILPARIWGDG DPEGVRQRAA AEMADTARAA AKLGVDTVIG FTGSKIWKYV AMFPPVTAEM IDDGYADFAR RWNPILDVFD EVGVRFAHEV HPSEIAYDYW TTKRTLEAID HRPAFGLNWD PSHFVWQDLD PVGFILDFAD RIYHVDCKDT KKRFDGRNGR LGSHLPWADP RRGWDFVSTG HGDVDWESAF RALNAIGYTG PISVEWEDAG MDRLRGAAEA VTYIRSLLFD KPEAAFDAAF STERN
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