Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_11140 |
Symbol | |
ID | 8386451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1149802 |
End bp | 1151202 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644975204 |
Product | uncharacterized AP superfamily protein |
Protein accession | YP_003132997 |
Protein GI | 257055165 |
COG category | [R] General function prediction only |
COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0415876 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGAAAC TGCTGGTGCT CGACGTCGTG GGCCTGACCC CCGCGCTGCT TCGGTACATG CCGAACCTGT CGCGGATCGC CGGCCGGGGG TGGAAGGCCG AACTCGGCAC GGTGTTGCCC GCCGTCACCT GTAGCGCGCA GTCGACGTTC CTCACCGGGA CGCTGCCCGC CGAGCACGGC ATCGTCGGCA ACGGCTGGTA CTTCCGCGAT CTCGGGGAGA TCTACCTGTG GCGGCAGCAC AACAAACTCG TGCAACGGCC GAAGGTCTGG GAGATCGCTC GCGCGGCGCG TCCCGACTAC ACCGCCGCGA ACGTGTGCTG GTGGTACGCG ATGGGGATGA CCACCGACAT CACGGTCACC CCTCGCCCCA TCTATCACGC CGACGGCCGT AAGTCGCCGG ACTGCTACGT GCGCCCGCCG CATCTGCACG ACGCGCTCAC CGCAGAGCTC GGGGAGTTCC CACTGTTCCA GTACTGGGGT CCCACGGCGT CCATCGTGTC GTCGAAGTGG ATCGTGGGTG CCGTGCGGCG GATCCTGCGC ACCGACAACC CCGACCTGTT GCTGGCGTAC GTGCCGCATC TCGACTACGA CCTGCAACGG TACGGCCCCG ATTCGCCGCA GGCGGCCAAG GCTGCCAGGG AGGTCGACGC CGCGTTGGCG CCGTTGTTGC ACGACGCCGA GAGCGCGGGC TCCACGGTGG TGGTCCTGTC GGAGTACGGC ATCACACCCG TGGACACACC GGTGGACATC AACCGCGCGT TGCGTCGAGA GGGACTGTTG GAGGTCTACA CCCAGGACGG GATGGAGTAC CTGGACCCGT GGACCTCACG GGCGTTCGCC GTGGCCGATC ACCAGGTCGC CCACGTCTAC GTCGCCGACG AGAAGGACCT GGCGAGAGTC CGCAAGATCG TCGAGAACCT CACCGGGGTG GACGAGGTCC TGGACCGCGA GGCCCAGGCC CGCTACGGGC TCGACCACGA GCGGGCGGGG GAGTTCGTGG CGGTGGCCGA ACCCCGCGCC TGGTTCACCT ACTACTACTG GCTGGACGAC GATTACGCGC CGGATTACGC GCGAGGGGTG GAGATCCATC GCAAACCCGG CTATGACCCG GCGGAATTGT TCTTCGACCC CACCGACTCG CTGGCCAAGG TGAAAGCGGG GCTGAACCTG GTGCGTAAGA AGGTCGGGCT GCGCTACGCC ATGAACGTGG TGCCCACCGA TCCGAGGTGG GTGCGCGGCT CGCACGGCCG ATTGCCCGAT TCCCCGGAAC ACGGTCCCGT TCTGCTCTGC TCCGACCCGG CTGTTCCCTC CACTGTGGAG TCAAGGGGAC GTATCGAGGC CACCGAGGTT CGTGATCTTC TACTGAAACT GCAAGGAATC GACGAAGGAG CTCGACGATG A
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Protein sequence | MRKLLVLDVV GLTPALLRYM PNLSRIAGRG WKAELGTVLP AVTCSAQSTF LTGTLPAEHG IVGNGWYFRD LGEIYLWRQH NKLVQRPKVW EIARAARPDY TAANVCWWYA MGMTTDITVT PRPIYHADGR KSPDCYVRPP HLHDALTAEL GEFPLFQYWG PTASIVSSKW IVGAVRRILR TDNPDLLLAY VPHLDYDLQR YGPDSPQAAK AAREVDAALA PLLHDAESAG STVVVLSEYG ITPVDTPVDI NRALRREGLL EVYTQDGMEY LDPWTSRAFA VADHQVAHVY VADEKDLARV RKIVENLTGV DEVLDREAQA RYGLDHERAG EFVAVAEPRA WFTYYYWLDD DYAPDYARGV EIHRKPGYDP AELFFDPTDS LAKVKAGLNL VRKKVGLRYA MNVVPTDPRW VRGSHGRLPD SPEHGPVLLC SDPAVPSTVE SRGRIEATEV RDLLLKLQGI DEGARR
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