Gene Svir_10920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_10920 
Symbol 
ID8386429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1125569 
End bp1126174 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content66% 
IMG OID644975182 
Producttranscriptional regulator 
Protein accessionYP_003132975 
Protein GI257055143 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0917166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGCG ACACCGTTGC CGAGGACACC CGTTCCCGTT TACTGGCCAC GGCGTTGAAG 
CTGTTCAGCG AACACGGTGT GGGGGGAACG TCACTGCAGA TGATCGCCGA CGAGCTCGGC
GTGACGAAGG CGGCCGTCTA CTACCACTTC AAGACGAAGG ACGAGATCAC CGAGGCCGTC
GCCGCCCCGG CGTTGCAGGA GTTGATCGCC CGCATGGACG AGGCCGAGCG GCAGCGCACG
CGCGGCTCGC AGATCGACCA CGCGCTCGGC GGATTCGTCG ATCTCATCGT GCGGTACCGG
TCGCTCATCG CGTTGTTCAA CAGCGATCCC GGCATCATGC GTGCCATCGA ACGGTCACTG
GACGGCGTGG AGACCTTCGC CGCACGGATG CGGAAGCTGC TCGTGGGACC GGACCCGGAT
CTGGCCACCA CCCTCACCGC CAACGTCCTG CTCGCGGGCC TCGCGTTGGC CGGTGGTTCC
TCCGAGCACG CCCACTTGGA CGATGAGACG TTACGCACGC ACCTGTTCGA CATCGGCAGG
CGCATGCTCG GTAGGCCGAA ACGACGGCCG AAAACCGGAA CGGGAGTGGC CGAGGAAGGG
GCGTGA
 
Protein sequence
MSGDTVAEDT RSRLLATALK LFSEHGVGGT SLQMIADELG VTKAAVYYHF KTKDEITEAV 
AAPALQELIA RMDEAERQRT RGSQIDHALG GFVDLIVRYR SLIALFNSDP GIMRAIERSL
DGVETFAARM RKLLVGPDPD LATTLTANVL LAGLALAGGS SEHAHLDDET LRTHLFDIGR
RMLGRPKRRP KTGTGVAEEG A