Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_10620 |
Symbol | |
ID | 8386399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1092344 |
End bp | 1094272 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644975152 |
Product | asparagine synthase (glutamine-hydrolysing) |
Protein accession | YP_003132945 |
Protein GI | 257055113 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.295992 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTGCGGCC TGCTTGGACT GGTCTGTGGC AGTGAGGATG ACGCGGCGAG CCTCAAGGAC GCCGTCGGCC GCGCGCTGCG CTGTCAGCGA CATCGCGGTC CGGATGAGAC CGACATTTGG GCGAATGGCC AGGTCATCTA TGGCTTCAAT CGGCTCGCCA TCATCGACCT CGAGCACTCA CGCCAACCAC TGACCTGGGG GCCCGAGGAC AATCCCACGC GCTACACCAT CATCTTCAAC GGTGAGATCT ACAACTACCT CGAGCTACGC GAGGAACTAG AGAAAGAACA CGGTGCGAAA TTCGCCACAG CAGGTGACAC CGAGGCGATC GTCGCGGCCT ACCACCACCT CGGCCCGGCG GCCGTCGGTC GGCTGCGGGG CATGTTCGCG TTCTTGATCT GGGACTCCGA ACGCAGCGTG CTCTTCGGCG CGCGGGACCC CTTCGGCATC AAGCCGCTGT TCTACTCGAC GGGTCCGAAG GGCGTCGCGT TCGCCAGCGA GAAGAAGAGC CTGCTGGAGC TGTCGTCCAC GCTGGGTGTG GAGCCCGAGC TGGACCGCAC GGCGTTGCAG CACTACCTGA CGCTGCAGTA CGTGCCGGAA CCGGAGTCAC TGCACCGAAG CATCCGGCGC ATCGAGTCCG GCACGTCCTT CACCGTGACC CCGGGTGGGG AGCTGAAGAC GGAGCGCTAC TTCTCCCCCG AGTTCCGCTC ACAACCGGTG TCAGGCGCCG CTCAGGTGGC GGCACTGCAC GAGAGCATCG CCGAGGTCTT GCGCGACTCG GTGGCCAAGC ACATGCGTGC CGACGTCACG GTGGGCGCGT TCCTGTCGGG TGGTATCGAC TCCACCGCCA TCGCCGCCCT GGCGAAGGAG CACAACCCGG ACCTGATCAC CTTCACCACC GGGTTCGAAC GCAAGGGGTA CTCCGAGGTG GACGTCGCCG CCGAGTCCGC CGCCGCCCTC GGGGTCAAAC ACGTGGTGCG CACCGTCTCC GCCGAGGAGA TGATGGAGAC ACTGCCCCTG ATCGTGTGGT ACCTCGACGA CCCGGTGGCC GATCCGGCGC TCGTGCCGCT GTGGTTCATC GCCCGCGAAG CACGCAAGCA CGTGAAGGTG GTGCTGTCGG GTGAGGGCTC CGACGAGCTG TTCGGCGGGT ACACGATCTA TCGGGAGCCG CTGTCACTGG CGCCGTTCGA GAAGGTCCCC GGCGGCGTGC GCAAGCTCAT CGGCAAGGCT TCCACGCTGA TCCCCGAGGG CACGCGCGGC AAGGACCTGT TGCGCCGTGG TGCGTTGACC CTGGAAGAGC GGTACTACGG CAATGCCCGC CTGTTCCGGG ACGACCAACT GAAGCCGATT CTGCGGACGT TCCGCGAAGG GATCGGCCAC CGCGACGTCA CCGCGCCGTG GTATCGGCTG TCCCGCGGAT GGGACCCGGT GGCCCGCATG CAGCACGTCG ACCTGTTCAC GTGGCTGCGC GGGGACATCC TCGTCAAGGC CGACAAGGTG ACGATGGCCA ACTCGCTGGA GCTGCGAGTG CCGTTCTTGG ACGCCGAGGT GTTCCGCGTC GCGTCGACCA TCCCGCTGGA CCAGAAGATC ACCAAGGAGA CCACGAAGTT CGCGTTGCGT CGGGCGTTGG ACGGCATCGT GCCGGCCCAC GTGCTCAACC GTCGCAAGCT GGGCTTCCCG GTGCCGATTC GGCACTGGCT GCGCTCCGAG ATGTACGACT GGGCCCGCGG CATCATCAGC GAGTCGAAGA CCGACGAGCT GCTCGACAAG CGCGCGATCC TCGCGATGTT GGAGGAGCAC CGCAACGGCA CGCTCGATCA CAGCCGGCGG CTGTGGGCGT TGTTGGTCTT CATGCTCTGG CACGGCATCT TCGTCGAGGA CCGGATCAAG CCGGAGGTGC CCGAGCCGCA GTATCCGGTG CAGCTCTAA
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Protein sequence | MCGLLGLVCG SEDDAASLKD AVGRALRCQR HRGPDETDIW ANGQVIYGFN RLAIIDLEHS RQPLTWGPED NPTRYTIIFN GEIYNYLELR EELEKEHGAK FATAGDTEAI VAAYHHLGPA AVGRLRGMFA FLIWDSERSV LFGARDPFGI KPLFYSTGPK GVAFASEKKS LLELSSTLGV EPELDRTALQ HYLTLQYVPE PESLHRSIRR IESGTSFTVT PGGELKTERY FSPEFRSQPV SGAAQVAALH ESIAEVLRDS VAKHMRADVT VGAFLSGGID STAIAALAKE HNPDLITFTT GFERKGYSEV DVAAESAAAL GVKHVVRTVS AEEMMETLPL IVWYLDDPVA DPALVPLWFI AREARKHVKV VLSGEGSDEL FGGYTIYREP LSLAPFEKVP GGVRKLIGKA STLIPEGTRG KDLLRRGALT LEERYYGNAR LFRDDQLKPI LRTFREGIGH RDVTAPWYRL SRGWDPVARM QHVDLFTWLR GDILVKADKV TMANSLELRV PFLDAEVFRV ASTIPLDQKI TKETTKFALR RALDGIVPAH VLNRRKLGFP VPIRHWLRSE MYDWARGIIS ESKTDELLDK RAILAMLEEH RNGTLDHSRR LWALLVFMLW HGIFVEDRIK PEVPEPQYPV QL
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