| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_10400 |
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| Symbol | |
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| ID | 8386377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1070249 |
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| End bp | 1071718 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644975130 |
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| Product | arabinose efflux permease family protein |
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| Protein accession | YP_003132923 |
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| Protein GI | 257055091 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0449426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACTCGA AGATCGACGA GTCCGATCCA CGGCGGTGGC GGGCACTGGC TGTCACGTTG
ACGGCCGGGT TCATGTCCTT ACTCGACGTC AGCATCGTCA ACGTGGCCCT GCCGGCGATC
CAGCAGAGCC TGGGCGCTTC CACGGCCGGT GTGCAGTGGG TCGTGTCGGG GTACGCGCTG
ACGTTCGGGC TCGTGCTGGT GTCCGGCGGC AGGCTCGGTG ACGTACTGGG CAGACGACGG
ATGTTCCTGT TCGCGCTGTC GGCATTCGTG TTGACCAGTG CGCTCGCCGG GGCGGCCGTC
AACGAGACGA TGCTGGTGGC CGCCCGGCTG TTGCAGGGCA TGGCGGCGGG CATGCTGACC
CCGCAGAACA CCGGGTTGAT CCAGGAGCTG TTCAGCGGCG CGGAACGGGG GAGGGCGTTC
GGCCTGTTCG GTACCACCGT GTCGCTGTCC ACGGCTGTGG GACCGGTGGT GGGTGGTTCG
ATCATCGCTC TTTTCGGAGC GGAGAACGGC TGGCGTTGGG TGTTCTTCGT CAACGTGCCC
ATCGGCGCGC TCGCACTCGT GTTGGCCGCC CGGTTGCTAC CGCGGGCTCC CCGGCGTGAC
TCCCCGTTAC GGTCGGAACT GGACTTCGTG GGTGTCGGCC TGCTGGGTGT GGCCGTGCTC
GGGGTGCTGT TCCCGCTGGT GCAATCCGAT CAAGATGGGC TGGCCGCGTT CTGGTGGATG
CCACTGCTGG CCGTCCCGCT CGGGGCCGCC TTCGTGTTGT GGGAACGGCG GGTCGTCAGG
CGTGGCGGCG CGCCACTGCT CGACGTACGA CTGTTCACCG AAACACCGGG GTACGCGATC
GGCGCGGCGA TCGGCGCGGT GTACTTCGCG GGATTCTCCG GGATCTGGTT GGTGTTCGCC
CTGTTCTTCC AGCAAGGACT GGGGTACACG CCGCTGGAGT CCGGGTTGGT GGTGACACCG
TTCGCCATCG GGGCCGCCGT GTCGGCGACC GTGGCGGGAA GGCTCGTGGC ACGTCTGGGG
AGACGGTTGA CCCTGCTTGG ACTGTCCTTG GTGACGGTGG GGTTGACGGT GGTGGGAGTC
GCCGTGCCGA TGGTGTCCGA CTCCATGGCC GGGTTCGCCG CCGCGGTCCC GCTGCTGATC
GCGGGGGTGG GCGGTGGCAT GGTGATCTCA CCCAACACCA CGCTGACATT GGAGCAGGTG
CCCACGCGGA TGGCCGGAGT CGCCGGGGGA GCGCTGCAGA CGGGGCAACG AATCGGCACC
GCGATCGGGG TGGCCGTGCT GGCGTCGATG TTCCACGCGG GCATCGATTC GGCGGGCGGC
TATCAGGCGG GACTGCGGTG GGCGATGGTG AGCGCCGTGA CCATAGTCGT CGTGGCCCTG
GTCCTGGCCG TGGTCGATGC GCGTCGACGC CCCAGGCGTT CCCAGCCGGA ATCGGTACGA
ACCGCGAGCA CCGCTACTCC TATGGAGTGA
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| Protein sequence | MNSKIDESDP RRWRALAVTL TAGFMSLLDV SIVNVALPAI QQSLGASTAG VQWVVSGYAL
TFGLVLVSGG RLGDVLGRRR MFLFALSAFV LTSALAGAAV NETMLVAARL LQGMAAGMLT
PQNTGLIQEL FSGAERGRAF GLFGTTVSLS TAVGPVVGGS IIALFGAENG WRWVFFVNVP
IGALALVLAA RLLPRAPRRD SPLRSELDFV GVGLLGVAVL GVLFPLVQSD QDGLAAFWWM
PLLAVPLGAA FVLWERRVVR RGGAPLLDVR LFTETPGYAI GAAIGAVYFA GFSGIWLVFA
LFFQQGLGYT PLESGLVVTP FAIGAAVSAT VAGRLVARLG RRLTLLGLSL VTVGLTVVGV
AVPMVSDSMA GFAAAVPLLI AGVGGGMVIS PNTTLTLEQV PTRMAGVAGG ALQTGQRIGT
AIGVAVLASM FHAGIDSAGG YQAGLRWAMV SAVTIVVVAL VLAVVDARRR PRRSQPESVR
TASTATPME
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