Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_10090 |
Symbol | |
ID | 8386346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1037289 |
End bp | 1038077 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644975099 |
Product | secreted trypsin-like serine protease |
Protein accession | YP_003132893 |
Protein GI | 257055061 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5640] Secreted trypsin-like serine protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.332384 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.811514 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCACGA ACATCCGGCG TCGACTCGTG ATAGCCCTGA CGGTGTTGGC AGGCGCGTTG TGTGTGCCCG CCAGTCATGG GGCGGGGGCC GCGCAACCCA TCGTCGGTGG TACCGCCGCG GTCATCGATG ACCACCCCTA CGCCGTGTTC CTCGTCGACG GTCGGGGGGA CCAGTACTGT GGGGGCGCGG TGATCTCTCC CACCGAGGTC CTCACGGCCG CGCATTGCGC TCTCGCCGTA CGGAAATCCG ATCTCCGTGT CGTCGTCGGG CGTGAGCACG TCGATTCCCG ACAGGGCGAG GAGCTCGGGG TCAGCGATAT CTGGGTCGCC CCCGGGTACC GGGACCCGCT CTCCGGTGAG GACATCGCCG TGTTGACGTT GTCCGAACGA GTGTCCGCCT CGGCCGCGCG GTTGCCCGAC AGCGCCGACA GCGAGCTGTA CGAGCCGGGC ACCATGGCCA CCGTGGTCGG CTGGGGAAGG CTGTACGAGA ACGGACCGAA GCCGGGTCGG CTGCACGCGG CCGAGGTGCC GATGGTGAGC GACAGCGCCT GTGCGGACGT GTTCCGTTCG TTCGACCCGG AGACGATGGT GTGCGCCGGG TACGCCGAAG GCGGGGTCGA CGCCTGCCAA GGGGACTCCG GTGGGCCGCT GTTGGTGGAC GGCACGGTGG TCGGCATCGT GTCGTGGGGT GACGGCTGTG CCGAGGCGGG TAAACCCGGC GTCTACACCC GCGTGTCGAC CTACACCGAC GACATCGAAT CCGATCTGAT ACGCAGAACG GGTGAGTGA
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Protein sequence | MFTNIRRRLV IALTVLAGAL CVPASHGAGA AQPIVGGTAA VIDDHPYAVF LVDGRGDQYC GGAVISPTEV LTAAHCALAV RKSDLRVVVG REHVDSRQGE ELGVSDIWVA PGYRDPLSGE DIAVLTLSER VSASAARLPD SADSELYEPG TMATVVGWGR LYENGPKPGR LHAAEVPMVS DSACADVFRS FDPETMVCAG YAEGGVDACQ GDSGGPLLVD GTVVGIVSWG DGCAEAGKPG VYTRVSTYTD DIESDLIRRT GE
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