Gene Svir_09670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_09670 
Symbol 
ID8386304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp996386 
End bp997147 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content69% 
IMG OID644975057 
Productuncharacterized lactam utilization protein B-like protein 
Protein accessionYP_003132851 
Protein GI257055019 
COG category[R] General function prediction only 
COG ID[COG1540] Uncharacterized proteins, homologs of lactam utilization protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.673064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.33099 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGCGG AGATCGACCT CAACAGTGAC TTGGGTGAAG GATTCGGCGC GTGGCCACTC 
GGTGACGACG AGGCCTTGTT GGACGTGGTG ACCAGCGCCA ACGTGGCATG TGGGTTCCAC
GCGGGTGATC CGAGTGTGCT GCGCCGGGTC ACCGAGCGGG CGGTGGAGCG TGGCGTCGTC
ATCGGGGCCC AGGTCGGTTA TCGCGACCTC GCCGGATTCG GGCGTCGGTT CATCGACATG
GATCCGCGCG AGCTCACCAA CGACATCATC TACCAGATCG GTGCGCTCGA CGGGTTCGCC
AGGATCGCCG GGTCGTCGGT GCGTTACGTC AAACCCCACG GCGCGCTCTA CAACGCCGTG
GTCACCCACG CCGAACAGGC CGCCGCCGTG GTCGAGGCGA TCCGGAGTTA CGACGCCGAG
CTGGCCGTGT TGGGGCTTCC GGGGTCGGAA CTGCTCCGTC AGGCGGAGGC GGCGGGACTC
TCGGTCGTGC CGGAGGCGTT CGCCGACCGT GCTTACACGG CCGAGGGCGG TTTGGTGCCG
CGGCGACAGC CCAACGCCGT CGTACGTGAT CCGGACGAGG TCGTGCGGCG CAGCGTCCGG
ATGGTGGTGG AAGGGCTCGT GGAGGCGATC GACGGCAGCG GTTTGACGTT GAGCCCGCGT
TCCCTGTGCG TCCACGGTGA CACCCCCGGC GCCGTTGACC TGGCCCGGCG CGTGCGTAAG
GCGCTGACCG ACGCCGGTGT GTCCCTGCGA TCGTTCGTGT GA
 
Protein sequence
MGAEIDLNSD LGEGFGAWPL GDDEALLDVV TSANVACGFH AGDPSVLRRV TERAVERGVV 
IGAQVGYRDL AGFGRRFIDM DPRELTNDII YQIGALDGFA RIAGSSVRYV KPHGALYNAV
VTHAEQAAAV VEAIRSYDAE LAVLGLPGSE LLRQAEAAGL SVVPEAFADR AYTAEGGLVP
RRQPNAVVRD PDEVVRRSVR MVVEGLVEAI DGSGLTLSPR SLCVHGDTPG AVDLARRVRK
ALTDAGVSLR SFV