Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_09670 |
Symbol | |
ID | 8386304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 996386 |
End bp | 997147 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644975057 |
Product | uncharacterized lactam utilization protein B-like protein |
Protein accession | YP_003132851 |
Protein GI | 257055019 |
COG category | [R] General function prediction only |
COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.673064 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.33099 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCGCGG AGATCGACCT CAACAGTGAC TTGGGTGAAG GATTCGGCGC GTGGCCACTC GGTGACGACG AGGCCTTGTT GGACGTGGTG ACCAGCGCCA ACGTGGCATG TGGGTTCCAC GCGGGTGATC CGAGTGTGCT GCGCCGGGTC ACCGAGCGGG CGGTGGAGCG TGGCGTCGTC ATCGGGGCCC AGGTCGGTTA TCGCGACCTC GCCGGATTCG GGCGTCGGTT CATCGACATG GATCCGCGCG AGCTCACCAA CGACATCATC TACCAGATCG GTGCGCTCGA CGGGTTCGCC AGGATCGCCG GGTCGTCGGT GCGTTACGTC AAACCCCACG GCGCGCTCTA CAACGCCGTG GTCACCCACG CCGAACAGGC CGCCGCCGTG GTCGAGGCGA TCCGGAGTTA CGACGCCGAG CTGGCCGTGT TGGGGCTTCC GGGGTCGGAA CTGCTCCGTC AGGCGGAGGC GGCGGGACTC TCGGTCGTGC CGGAGGCGTT CGCCGACCGT GCTTACACGG CCGAGGGCGG TTTGGTGCCG CGGCGACAGC CCAACGCCGT CGTACGTGAT CCGGACGAGG TCGTGCGGCG CAGCGTCCGG ATGGTGGTGG AAGGGCTCGT GGAGGCGATC GACGGCAGCG GTTTGACGTT GAGCCCGCGT TCCCTGTGCG TCCACGGTGA CACCCCCGGC GCCGTTGACC TGGCCCGGCG CGTGCGTAAG GCGCTGACCG ACGCCGGTGT GTCCCTGCGA TCGTTCGTGT GA
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Protein sequence | MGAEIDLNSD LGEGFGAWPL GDDEALLDVV TSANVACGFH AGDPSVLRRV TERAVERGVV IGAQVGYRDL AGFGRRFIDM DPRELTNDII YQIGALDGFA RIAGSSVRYV KPHGALYNAV VTHAEQAAAV VEAIRSYDAE LAVLGLPGSE LLRQAEAAGL SVVPEAFADR AYTAEGGLVP RRQPNAVVRD PDEVVRRSVR MVVEGLVEAI DGSGLTLSPR SLCVHGDTPG AVDLARRVRK ALTDAGVSLR SFV
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