| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_09430 |
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| Symbol | |
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| ID | 8386280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 970074 |
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| End bp | 972191 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644975033 |
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| Product | DNA/RNA helicase, superfamily I |
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| Protein accession | YP_003132827 |
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| Protein GI | 257054995 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3973] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.260549 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGGAGT CCCGGATCAA ACGGGCCGAG ATCGCCATCG AACAAGCACA CGTGGACCGG
GTGTATGTCC GGCTCGCGGA GCTGCGTGCG CAGGCGGAGG CCATGCGCGC CCGTGGCTAT
GAGCTGGGTC ATGGCGCGCA ACGTGAGGCC GTGTTCGAAC AGGCGTCGAT GCTGTACGAG
CGCGACATGA TGGTGTTCCA CGCCAACCAG ACCCTCCAGA CGTTGGACGC CGAGTACGAG
GGACTGGTGT TCGGCAGACT CGACCACATC GGTTCGGAAA CCGTCTACGT CGGACGGCTC
GGCATTCGCG ACGCGGAGTT CAACAACCTC GTCACCGACT GGCGGGCGCC GGCGGCGGCG
GCGTTCTACC AAGCGACGGC CGAGGAACCG ATGGGCGTGG TGCGCCGTCG GGTGATCCGC
TGCTCGGGTC AGTCGGTGCT CGACATCGAC GACGACGTGT TGATGCCGGA AGCGGTTCCG
GACGACATGA ACGTGGTCGG CGAAGGCGCG CTGATGGCGG CACTGGGCCG TTCGCGAGGC
GACACGATGC GCGACATCGT CGCCACCATC CAGAAGGAGC AGGACGAGGT CATCCGCGCG
CCGTGGCGCG GGGTGACCGA GATCACCGGC GGGCCGGGTA CGGGGAAGAC CGCCGTGGCA
CTGCACCGGG CCGCGTACCT GCTGTACCGG TACCGGCGTC AGCTCGGGGG CGCGGGCGTG
CTCGTGGTGG GCCCTTCGGG GGTGTTCACG AACTACATCT CCCGCGTGCT TCCGTCGATG
GGCGAGACCA ACGTCGAGCT GCGGTCCCTG GGCCAGGTGC TGGACGGTTT GGACGCCACC
CGCCACGACC CGGCCCCGCT GGCGGCCATC AAGGGCTCGT TGCGGATGCG GAAGGTGCTC
AGCCGGGCGT TGCGTGACAC GCCGCCGGAC GCCCCCACCG AGATGAAGAT CGTCTACAAG
GGCGAGGTCC TGAGGCTGAA CGCCAAGGAG CTCGACAAGG TCCGGCGCAA GGTACACGGC
CACGGGCACC CACCGAACCG CTCGCGCGTC CGGGCCGCCG AAGCGCTCCT GGAGGCGTTG
GCGGACAAGG CGGAGGAGTA CGCCAGCGCC GACGGCCGTG TCATCGACCG AGCCGAACTG
ATCACCGAGC TGGGCGAACG ACTCGACTTC CACCGGTTCC TGGTGACGTG GTGGCCGGTG
CTGTACCCGG CGCAGGTGCT GCGGTGGCTC GGCGACGAAC GCCGGCTGGC GCGCGCGGCC
AAGAACGTGC TGACCGCCGA GGAGATCGCG CTGCTCTCGC GGTCGCTGGC CGATCGGGAT
CGCGAGTGGA CGGTGGCTGA CATCGCCCTG CTCGACGAAC TGCGGGTGCT GCTCGGGCCG
CCGCCGAAAC GGCGGCGCCG AGGGCGTGTG GAAACGGAAC CCGAGCACTC GCCGGACGGG
TCCCGGCGTC GTCCCGAGCA CTACGACGAG TACTCCCACA TCGTCGTGGA CGAGGCGCAG
GATCTGTCCC CCATGCAGTG GCGCATGGTG GGCCGCCGGG GTAAGTACGC GAGCTGGACC
GTCGTGGGCG ATCCCGTGCA GAGCTCGTGG CCGGACCCCG AGGAGGCCGC GAAGGCGCGG
GACCAGGCGT TCGGGCCGCA CGCCAAGCGC AGGCGTTATG CGCTGCGCAC CAACTACCGC
AACTCGGCGG AGATCTTCGA ACTCGCCTCC CGGGTGGTCG CGGACCACGC CCGACCGGAC
GATCTGCCCC GTGCGGTACG GACCACCGGG GTGCGGCCGC AGATCCGCCG GGTCGAGCCG
GACGCCCTGG AGAACGCCGC GCAGACGGCC GCCAAGGAAC TCCTCGACGC CGTCGAGGGC
ACCGTGGGCG TGATCTGCGC CATGGACCGG GTTCCCGAGG TCGAACGATG GTTCTCGGAT
GCCGAGGACC GGCTGAAGGT GGTCGGCAGC CTCGATTCGA AGGGCCTGGA GTACGACGCC
GTGGTGCTGG TGGAGCCGAC GGAGCTGATC ACCGAGTCGC TGACGGGACG GCGGGTGCTG
TACGTGGCGT TGACGCGGGC CACGCAACAG CTCACGGTGC TGGCCTCCGA CGACGCCTGG
CTGACACCCG AGAAGTGA
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| Protein sequence | MSESRIKRAE IAIEQAHVDR VYVRLAELRA QAEAMRARGY ELGHGAQREA VFEQASMLYE
RDMMVFHANQ TLQTLDAEYE GLVFGRLDHI GSETVYVGRL GIRDAEFNNL VTDWRAPAAA
AFYQATAEEP MGVVRRRVIR CSGQSVLDID DDVLMPEAVP DDMNVVGEGA LMAALGRSRG
DTMRDIVATI QKEQDEVIRA PWRGVTEITG GPGTGKTAVA LHRAAYLLYR YRRQLGGAGV
LVVGPSGVFT NYISRVLPSM GETNVELRSL GQVLDGLDAT RHDPAPLAAI KGSLRMRKVL
SRALRDTPPD APTEMKIVYK GEVLRLNAKE LDKVRRKVHG HGHPPNRSRV RAAEALLEAL
ADKAEEYASA DGRVIDRAEL ITELGERLDF HRFLVTWWPV LYPAQVLRWL GDERRLARAA
KNVLTAEEIA LLSRSLADRD REWTVADIAL LDELRVLLGP PPKRRRRGRV ETEPEHSPDG
SRRRPEHYDE YSHIVVDEAQ DLSPMQWRMV GRRGKYASWT VVGDPVQSSW PDPEEAAKAR
DQAFGPHAKR RRYALRTNYR NSAEIFELAS RVVADHARPD DLPRAVRTTG VRPQIRRVEP
DALENAAQTA AKELLDAVEG TVGVICAMDR VPEVERWFSD AEDRLKVVGS LDSKGLEYDA
VVLVEPTELI TESLTGRRVL YVALTRATQQ LTVLASDDAW LTPEK
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