| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_09250 |
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| Symbol | |
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| ID | 8386262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 949780 |
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| End bp | 953163 |
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| Gene Length | 3384 bp |
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| Protein Length | 1127 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644975016 |
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| Product | pyruvate carboxylase |
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| Protein accession | YP_003132810 |
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| Protein GI | 257054978 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1038] Pyruvate carboxylase |
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| TIGRFAM ID | [TIGR01235] pyruvate carboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.582484 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCGCA AGGTACTCGT CGCCAACAGG GGCGAGATCG CGATCCGCGC GTTCCGTGCG
GCCTACGAGT TGGGCGCGGG AACCGTCGCG GTGTTCCCCT ACGAGGACCG CAACTCACTG
CATCGGCTGA AAGCCGACGA GGCGTACGAG ATCGGCGAGC CGGGTCACCC GGTGAGGGCC
TATCTGTCGG TCGAGGAGAT CGTGAACGCC GCCAGGCGGG CGGGTGCCGA CGCGGTCTAT
CCGGGCTACG GGTTCCTCTC CGAGAACCCG GATCTGGCCA GGGCGTGCGA GGAAGCCGGG
ATCACGTTCA TCGGGCCGAG TGCCGAGGTG TTGGAGCTGA CCGGCAACAA GGCGCGCGCG
GTACACGCGG CGAAGCAGGC CGGTGTCCCC GTCCTCGGGT CCTCGGAGCC GTCAGCCGAT
GTGGACACGC TGGTCGAGGC GGCCGAGGAG CTGGGCTTCC CGTTGTTCGT CAAGGCCGTC
GCCGGTGGTG GTGGTCGCGG TATGCGGCTG GTACAGGACC GGGCCTCGTT GCGGGAGTCG
ATCGAGGCCG CGGCGCGCGA GGCCGAGTCG GCTTTCGGCG ATCCCACGGT GTTCCTGGAG
AAGGCGGTCG TCCAACCCCG GCACATCGAG GTGCAGATCC TCAGCGACGG GACCGGTCGT
GAGGACGGTG TCATCCACCT GTACGAACGG GACTGCTCGG TGCAGCGACG GCACCAGAAG
GTGATCGAAC TCGCCCCGGC CCCCAATCTC GACCCCGAGT TGCGGGAACG CATCTGCGCC
GACGCGGTGC GGTTCGCCCG GCAGATCGGA TACCGCAACG CGGGCACGGT GGAATTCCTC
GTGGACCGCG ACGGCAACCA CGTGTTCATC GAGATGAACC CACGCATCCA GGTGGAACAC
ACGGTGACCG AGGAGGTCAC CGACGTGGAC CTGGTGCAGG CCCAGATGCG GATCGCCGCG
GGGGAGACGC TGGCCGATCT CGGGTTGTCG CAGGAGACCG TGTACCTGCG TGGCGCGGCG
TTGCAATGTC GCATCACCAC CGAGGACCCG GCCAACGGAT TCCGGCCCGA CACCGGCATG
ATCAGCGCCT ATCGATCACC CGGTGGGGCG GGGATCCGGC TCGACGGCGG TACGGCGTTC
GCGGGTGCGG AGGTCAGCGC GCACTTCGAC TCCATGCTCG TGAAGCTCAC CTGCCGGGGC
CGGACGTTCG CCACGGCCGT GGACAAGGCC CAGCGGGCGG TGGCCGAGTT CCGCATCCGG
GGAGTGGCCA CCAACATCCC GTTCCTGCAA GCCGTGCTCG ACGACCCCGA TTTCCGCGCG
GGTCGCATCA CCACGGCGTT CATCGAGGAA CGTCCGTACC TGTTGACGGC TCGGCGTTCC
GCCGACCGGG GCACCAGGCT GCTCACGTAT CTGGCGGACG TGACCGTCAA CAAGCCCCAC
GGCGAACGGC CCCGGCTGAT CGACCCTGAG AAGAAGCTGC CCGAGGTGCC CGAGGGGGAG
CCGCCCGCCG GCTCGAAGCA GAAGTTGGAG GAGCTCGGAC CGGAGGGTTT CGCGCAGTGG
CTGCGGTCGT CGCCGTATCT CGGCGTGACC GACACGACGT TCCGCGACGC CCACCAATCG
CTGCTCGCCA CCCGGGTGCG CACCAAGGAC CTGCTCACGG TGGCGCCGGT CGTGGCGAGG
ACCACGCCGG AACTGCTGTC GGTGGAGTGC TGGGGCGGGG CGACCTACGA CGTCGCGTTG
CGATTCCTCG CCGAGGATCC GTGGGAGCGC CTGGCGGCGT TGCGTGAGGC GATCCCGAAC
ATCTGCCTGC AGATGTTGTT GCGGGGCCGC AACACCGTGG GCTACACGCC GTACCCCACG
GAGGTGACCG AGGCGTTCGT GGAGGAGGCC ACCGCCACCG GCATCGACAT CTTCCGCATC
TTCGACGCCC TCAACGACGT CGAGCAGATG CGTCCGGCGA TCGACGCGGT GCGGGCCACG
GGGAAGGCCG TGGCCGAGGT GGCGCTGTGC TACACGTCCG ATCTGCTGGA TCCCGACGAG
AAGATCTACA CGCTCGACTA CTACCTCAAG CTCGCCGAGC AGATCGTCGG AGCGGGGGCG
CACGTCCTGG CGATCAAGGA CATGGCCGGG TTGTTGCGGG CACCCGCGGC GGCCAAGCTC
GTGGGCGCGC TGCGCAGGGA ATTCGACCTG CCGGTGCACA TCCACACACA CGACACGGCG
GGTGGGCAGT TGGCGACCTA TCTCGCCGCC GTCGGCGCGG GCGCGGACGC CGTGGACGGC
GCCGTGGCGT CGATGGCGGG CACCACGTCG CAGCCGTCGT TGTCGGCGCT CGTGGCCGCC
ACCGACCATT CCGACCGGCC CACCGGTCTG AGCCTGCAGG CCGTCAGCGA CCTGGAGCCG
TACTGGGAGG CCGTGCGCAA GATCTACGCG CCGTTCGAGG CCGGACTGGC GTCCCCCACA
GGTCGGGTCT ACCACCACGA GATCCCCGGT GGGCAGCTGT CGAACCTGCG CACCCAGGCC
GTCGCGCTGG GATTGGGTGA CCGGTTCGAG GAGATCGAGG CGATGTACGC CGCCGCCGAC
CGCATCCTCG GTCGCCTCGT GAAGGTCACC CCGTCGTCCA AGGTGGTCGG TGATCTGGCC
CTGCATCTCG TGGGCGCGGG CGTGTCCCCC GAGGACTTCG AAGCCGATCC CGGCAAGTAC
GACATCCCCG ATTCGGTGAT CGGATTCCTG CGGGGCGAGC TGGGGGACCC GCCCGGTGGC
TGGCCCGAGC CGTTCCGCAG CAAGGCGCTG CAGGGACGCG CACAACCCCG CCCGACCGCG
GAACTGTCCG ATGAGGATCG GCGGGAGCTG GCGGAGAACC GGCGGGCGAC GTTGAACCGA
CTGTTGTTCC CGGGGCCGAC GAAGGAGTTC GAGGAGCACC GCCATGACTA CGGCGACACG
AGTGTGTTGC CGAGCAAGGA CTTCTTCTAC GGGTTGCGCC CGGGTGAGGA GTACGCGGTC
GATCTCGAGC CCGGGGTGCG GTTGCTGATC GAGTTGGAGG CGATCGGGGA GGCCGACGAA
CGGGGCATCC GCATCGTCAT GGCGACCCTC AACGGACAGC TGCGACCCAT CCAGGTGCGC
GACCGTTCGG TGGCCGTCGA CCTGCCGGCG AAGGAGAAGG CCGACAAGAA CAACCCGAAG
CACGTCGCGG CACCGTTCGC CGGCGTGGTG ACGGCGACGG TGTCCGAGGG TGATGTCGTG
AAGGCGGGTG ACACCGTGGC GACGATCGAG GCGATGAAGA TGGAGGCCAC CATCACCGCC
CAGACCGGTG GCACGGTGTC GCGACTGGCC ATCAACTCCG TGCAGCAGGT GGAAGGCGGC
GACCTGCTGG TGGTCCTGGA GTAA
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| Protein sequence | MFRKVLVANR GEIAIRAFRA AYELGAGTVA VFPYEDRNSL HRLKADEAYE IGEPGHPVRA
YLSVEEIVNA ARRAGADAVY PGYGFLSENP DLARACEEAG ITFIGPSAEV LELTGNKARA
VHAAKQAGVP VLGSSEPSAD VDTLVEAAEE LGFPLFVKAV AGGGGRGMRL VQDRASLRES
IEAAAREAES AFGDPTVFLE KAVVQPRHIE VQILSDGTGR EDGVIHLYER DCSVQRRHQK
VIELAPAPNL DPELRERICA DAVRFARQIG YRNAGTVEFL VDRDGNHVFI EMNPRIQVEH
TVTEEVTDVD LVQAQMRIAA GETLADLGLS QETVYLRGAA LQCRITTEDP ANGFRPDTGM
ISAYRSPGGA GIRLDGGTAF AGAEVSAHFD SMLVKLTCRG RTFATAVDKA QRAVAEFRIR
GVATNIPFLQ AVLDDPDFRA GRITTAFIEE RPYLLTARRS ADRGTRLLTY LADVTVNKPH
GERPRLIDPE KKLPEVPEGE PPAGSKQKLE ELGPEGFAQW LRSSPYLGVT DTTFRDAHQS
LLATRVRTKD LLTVAPVVAR TTPELLSVEC WGGATYDVAL RFLAEDPWER LAALREAIPN
ICLQMLLRGR NTVGYTPYPT EVTEAFVEEA TATGIDIFRI FDALNDVEQM RPAIDAVRAT
GKAVAEVALC YTSDLLDPDE KIYTLDYYLK LAEQIVGAGA HVLAIKDMAG LLRAPAAAKL
VGALRREFDL PVHIHTHDTA GGQLATYLAA VGAGADAVDG AVASMAGTTS QPSLSALVAA
TDHSDRPTGL SLQAVSDLEP YWEAVRKIYA PFEAGLASPT GRVYHHEIPG GQLSNLRTQA
VALGLGDRFE EIEAMYAAAD RILGRLVKVT PSSKVVGDLA LHLVGAGVSP EDFEADPGKY
DIPDSVIGFL RGELGDPPGG WPEPFRSKAL QGRAQPRPTA ELSDEDRREL AENRRATLNR
LLFPGPTKEF EEHRHDYGDT SVLPSKDFFY GLRPGEEYAV DLEPGVRLLI ELEAIGEADE
RGIRIVMATL NGQLRPIQVR DRSVAVDLPA KEKADKNNPK HVAAPFAGVV TATVSEGDVV
KAGDTVATIE AMKMEATITA QTGGTVSRLA INSVQQVEGG DLLVVLE
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