| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_08850 |
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| Symbol | |
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| ID | 8386222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 908755 |
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| End bp | 910599 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644974976 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_003132772 |
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| Protein GI | 257054940 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCTC TGCGCTCCCG AACCACGACC CACGGCCGCA ACGCCGCGGG AGCTCGCTCC
CTGTGGCGCG CGACCGGTAT GACCGACAGC GACTTCGGCA AGCCCATCGT CGCGATCGCC
AACTCCTACA CCCAGTTCGT ACCGGGACAC GTCCACCTCA AGGACCTCGG TGAGATCGTC
GCCGAGGCCG TGCGTGAAGC CGGCGGCGTG CCCCGCGAAT TCCACACCAT CGCGGTGGAC
GACGGCATCG CCATGGGCCA CAGCGGAATG CTGTACTCGT TGCCCTCGCG CGAGATCATC
GCCGACTCCG TCGAGTACAT GGTCAACGCC CACCAGGCCG ACGCGCTGGT GTGCATCTCG
AACTGCGACA AGATCACCCC TGGGATGCTC AACGCCGCCA TGCGGCTCAA CATCCCGACG
GTGTTCGTCT CGGGCGGCCC CATGGAGGCC GGTAAGGCCG TGGTCGTCGA CGGCGTCGCG
CACGCACCGA CCGACCTCAT CACCGCGATC TCCGCTTCGG CCAACTCCTC CGTCGACGAC
GAGGGGCTGT CCATCGTCGA GCGCTCCGCG TGCCCGACGT GCGGTTCCTG CTCGGGCATG
TTCACCGCGA ACTCGATGAA CTGCCTCACC GAGGCGCTGG GACTGTCGTT GCCCGGCAAC
GGGTCCACAC TGGCCACTCA CGCCGCGCGG AGGCAGCTGT TCGTCGACGC CGGACGCACG
GTGGTGGAAC TGGCCCGGCG TTGGTACGAG AAGGACGACG AATCGGCGTT GCCGCGTTCG
ATCGCGAGCA AGAAGGCCTT CGAGAACGCC ATGGCGTTGG ACATGGCGAT GGGCGGTTCC
ACCAACACCG TGTTGCACAT CCTCGCCGCC GCACAGGAGG GCGAGATCGA CTTCACGCTC
GACGACATCG ATCGCATCGG GCGTGAGGTG CCCTGCCTTT CCAAGGTCTC GCCGAACTCC
GACTACCACA TGGAGGACGT GCACCGCGCG GGCGGCATCC CCGCCATCCT GGGCGAGCTG
CATCGGGGTG GGTTCCTCAA CCCCGACGTC CACGCCGTGC ATTCCTCCTC GTTGGAGGAG
TGGCTGTCCA CGTGGGACAT CCGAGGGGGT TCCGCGTCGG AGGAGGCGTT CGAGCTGTTC
CACGCCGCGC CGGGTGGAAT GCGCACCACG GAGGCGTTCT CCACGACCAA CCGGTGGTCG
TCGCTCGACA CCGACGCGGA GAACGGCTGC ATTCGCGACG TCGCCCACGC CTACACCGCC
AGCGGTGGAC TCGCCGTGCT GCGCGGAAAT CTCGCGGAGA ACGGCGCGGT GATCAAGTCG
GCGGGCATCG ACGAGGAACT GTGGCGCTTC CGCGGCCCCG CCCGGGTGGT GGAGAGCCAG
GAGGAGGCCG TCTCGGTCAT CCTCAACAAG GAGGTGCAGC CCGGTGAGGT GCTCGTCGTT
CGCTACGAGG GACCGGCGGG CGGCCCGGGC ATGCAGGAGA TGTTGCACCC GACCGCGTTC
CTGAAGGGGG CGGGCCTGGG CAAGGTGTGC GCGCTCATCA CCGATGGACG TTTCTCGGGT
GGTTCCTCGG GCATCTCGGT GGGCCACATC TCCCCCGAGG CCGCCGCGGG CGGCAACATC
GGCCTGGTCG AAAACGGCGA CGAGATCCTC ATCGACGTGC ACGAGCGCAA GCTCGAACTG
CTCGTCGACG ACGAGGTCCT CGCCGAGCGG AGGGCCAAGA TGGAGGCTTC GGAACGGCCG
TGGCAACCCG CCGACAGGCA GCGGCCGGTG AGCGCAGCGC TGCGCGCCTA CGCGCGCATG
GCCACCTCGG CCGACACCGG CGCCGTACGT AACCCGGACA AGTGA
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| Protein sequence | MPALRSRTTT HGRNAAGARS LWRATGMTDS DFGKPIVAIA NSYTQFVPGH VHLKDLGEIV
AEAVREAGGV PREFHTIAVD DGIAMGHSGM LYSLPSREII ADSVEYMVNA HQADALVCIS
NCDKITPGML NAAMRLNIPT VFVSGGPMEA GKAVVVDGVA HAPTDLITAI SASANSSVDD
EGLSIVERSA CPTCGSCSGM FTANSMNCLT EALGLSLPGN GSTLATHAAR RQLFVDAGRT
VVELARRWYE KDDESALPRS IASKKAFENA MALDMAMGGS TNTVLHILAA AQEGEIDFTL
DDIDRIGREV PCLSKVSPNS DYHMEDVHRA GGIPAILGEL HRGGFLNPDV HAVHSSSLEE
WLSTWDIRGG SASEEAFELF HAAPGGMRTT EAFSTTNRWS SLDTDAENGC IRDVAHAYTA
SGGLAVLRGN LAENGAVIKS AGIDEELWRF RGPARVVESQ EEAVSVILNK EVQPGEVLVV
RYEGPAGGPG MQEMLHPTAF LKGAGLGKVC ALITDGRFSG GSSGISVGHI SPEAAAGGNI
GLVENGDEIL IDVHERKLEL LVDDEVLAER RAKMEASERP WQPADRQRPV SAALRAYARM
ATSADTGAVR NPDK
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