| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_07890 |
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| Symbol | |
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| ID | 8386126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 812315 |
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| End bp | 813841 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644974882 |
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| Product | arabinose efflux permease family protein |
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| Protein accession | YP_003132678 |
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| Protein GI | 257054846 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATGC ACCAGCGTTC CGCGGCACCT GCCGGTGCTC GGGCGGGGAT GGCGCTGTTG
GCGCTTCCCA CGTTTCTGCT GGGGCTGGAC GTGACGGTGC TGTACCTGGT GTTGCCCGCT
ATGGCGGCCG ATTTGGCTCC GTCGGCGACA CAGGTGCTGT GGATCATGGA CGCCTACGGA
TTCCTGCTCG CGGGCTTTCT TGTCACGATG GGAACGTTGG GCGATCGGGT GGGGCGGCGC
CGCCTTCTGA TGATCGGGAT CGCGGCTTTC GCTGCCGTGT CGGTATTCGC CGCGTTCGTC
CCGACTGCGG AGCTGTTGAT CGCTGCGCGT GCGCTGCTGG GTGTCGCGGG TGCGACCTTG
ATGCCCTCGA CCCTGGCGCT GATCTCGAAC ATGTTCCCTG ATCCCCGGCA GCGTGCCGTG
GCGATCGGCG TGTGGGCCAC GATGTTCGCC GGCGGTATGG CCGCCGGGCC GATCCTGGGC
GGTGTGCTGG TGGAGACCTT CTGGTGGGGA GCGGCGTTCT TGGTGGCCGT GCCGATCGCC
GTTGTCGTAC TGCTGCTCGG TCCAGCGGTA CTGCCCGAGT ACCGCGATGG GTGCGGCGAG
CGGGTCGATC TGGTCAGCGT GGCACTGTCT TTGGCGGCGG TCCTGCCGAT CGTCTACGCC
GTCAAGCGGG TAGCGGACTA CGGGTTGAGC GTCAGCGTCA TCGTCGGTGC CGTCATGGGA
ACGCTCGCGG GGTGGGGATT CTGGCGTCGA CAGCGCCGCT CGGATAACCC TCTGCTGGAC
GTCGCACTGT TCCGCAATAC GGCGTTCAGC GTGGCGCTGA CGGTCCTGCT CGTCGGCCTC
GTTGGCGTGG GCGGCAGCAT GTATCTGGTC ACCCAGTATC TGCAACTGGT CGAGGGTCTG
AGCCCGTTTG TCGCAGGCCT GTGGATGGGA CCTCCCGCGC TCGCGATGTT CATCGCCGCC
ATCGGGGCAC CACTGCTGGC GCGGCACATC CGGCCCGGTT ACATCATGGG CGGCATCCTG
TCCGTCTCTT GCGTCGGCTA CCTACTCCTG GCCAGCGCTG GTCTGGACGA TGAACTTCCT
GTTGCGGTCG GGTTCGCCTT CGTCTACCTC GGCCTCGGTG CGATCGCAGC CTTGGGAACC
GACATCGTGG TTGGAACGGC ACCGGCCTCG AAGTCCGGAT CGGCGGCCTC CCTATCTGAG
ACCGTGCAAG AACTGGGGAT CACGATCGGC GTGGCAGTCC TTGGCAGTCT CACCACCGCC
GTCTACCGAT CTCAACTGAC CACTCCCGAT GGCCTCGCCC GTGACGAGGT CGCTGCTTTC
ACCGACAGCC TCAGCGCCGC CACCGCCATC GCCGATCAGC TCCCGGCCGG CGCGCTCGTC
GAAGCGCAGC AAGCCTTCAC CATGGGCCTG AACATCGCCT CCGGCGTCGC CGGAGGCGCG
ATCGTGGTTG TCGCCGTTCT CTGCATGCGT ATGCTGCGTC ACGTGCCAAG ACTCGGTCAG
CCGAAACAAC CGAATCCCAA AGTTTGA
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| Protein sequence | MSMHQRSAAP AGARAGMALL ALPTFLLGLD VTVLYLVLPA MAADLAPSAT QVLWIMDAYG
FLLAGFLVTM GTLGDRVGRR RLLMIGIAAF AAVSVFAAFV PTAELLIAAR ALLGVAGATL
MPSTLALISN MFPDPRQRAV AIGVWATMFA GGMAAGPILG GVLVETFWWG AAFLVAVPIA
VVVLLLGPAV LPEYRDGCGE RVDLVSVALS LAAVLPIVYA VKRVADYGLS VSVIVGAVMG
TLAGWGFWRR QRRSDNPLLD VALFRNTAFS VALTVLLVGL VGVGGSMYLV TQYLQLVEGL
SPFVAGLWMG PPALAMFIAA IGAPLLARHI RPGYIMGGIL SVSCVGYLLL ASAGLDDELP
VAVGFAFVYL GLGAIAALGT DIVVGTAPAS KSGSAASLSE TVQELGITIG VAVLGSLTTA
VYRSQLTTPD GLARDEVAAF TDSLSAATAI ADQLPAGALV EAQQAFTMGL NIASGVAGGA
IVVVAVLCMR MLRHVPRLGQ PKQPNPKV
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