Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_07180 |
Symbol | |
ID | 8386056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 739291 |
End bp | 740013 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644974814 |
Product | transcriptional regulator |
Protein accession | YP_003132615 |
Protein GI | 257054783 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.268445 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGATCAT CGGCTACCAC GCACACGACG AGGAACCGGA TGAGCACCCT GCAAACCCTT GACCGAGGTC TGCGCGCGCT GGACATCATC TCGCAGAGTC CGGCCGGTAT CTCGGTGAGC GAGTTGGCCA CCGAGCTGGG CGTCCACCGT GCCATCTGCT ATCGCGTCGT GGCGACACTG GAGGCGCACT CCCTGATCAC CCGCACCGGC GACGGCAAGC TCCGCCTCGG GGTCGGCGCG GCCGTGCTCG CCTCCCGCTT CGAACCCCAG TTCATGCACG GGGCGCATCC GATCCTGCAG GAACTGGCCG AACGCACCAG GGCGACCGCG TTCATCGCCG CGGCCGAAGC GGACACGTGT GTGGTGATCA TGGTGGCCGA ACCGAGCGAG GCGGTCCTCC GGGTCGGCTA TCGGGTCGGG ACCCGGCATC CGCTGGACAA GGGCGCGTCC GGTATCGCGA TCCTCGCGCT GCGACCGGAA CGCCGCAGCG ATCCCGAACT CGTCAAACAG GCCCGTAAGG ACGGTTACAG CGTCACCTTC GGGCAGCTCA ACCGAGGTGC GGTCGGCGTC TCGTCCGGGA TCCGTGTCCC GGGAGGGGCT TCACCGGGGT CCCCGTTGGA ACGCAGCGTG GGTGTCGTGG CCATCGAGGG CCTCGACACC GAGAAGGCCG CCCGCGAGGT CGTATGGGCT TCGCAGCAGC TCTCCCAGTT GATCACGGGC TGA
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Protein sequence | MRSSATTHTT RNRMSTLQTL DRGLRALDII SQSPAGISVS ELATELGVHR AICYRVVATL EAHSLITRTG DGKLRLGVGA AVLASRFEPQ FMHGAHPILQ ELAERTRATA FIAAAEADTC VVIMVAEPSE AVLRVGYRVG TRHPLDKGAS GIAILALRPE RRSDPELVKQ ARKDGYSVTF GQLNRGAVGV SSGIRVPGGA SPGSPLERSV GVVAIEGLDT EKAAREVVWA SQQLSQLITG
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