| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_06940 |
|---|
| Symbol | |
|---|
| ID | 8386032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 709899 |
|---|
| End bp | 711137 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644974791 |
|---|
| Product | signal transduction histidine kinase |
|---|
| Protein accession | YP_003132592 |
|---|
| Protein GI | 257054760 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.520688 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.077784 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTGGGTGT GCCTGGAAAC CGTTGCGTCA CAAAGAATTC CAGTCATAGT TGCGGGTGGT
GTGACCGTGG CGTTGCTCGG TGCGGCGACG TTCGTGGCGG TGATGCACAC CCTGCAACTG
TGGCAAGTTC AGCGCCGTGT CGAATCGGTG GAGGATGAAC TCACTCAATT GGCTGACGAA
ATCTTGCCCG TGGCTGCTCG GCGGCTACGT GAAGGCGCGT CACTAGCCAC CATTTCGGCT
GAAATTCCGA GCCTTTCGAA TGACGTTCCC TTTCGCATTT TGCGGCTCTT TATGAAAGAG
ATCGAAGCGA GCGAACGGCA GCGGGAGGCG GCGATGTCCG CGTGTGCCAA CGCGGCGGGC
CGCATGCAGG CCATGGCCGT CGGCATGCTC GCCGATCTCC GCGAGATGGA GTACCGGCAC
AACGAGGACG TGCTCGGCGA TCTGCTCAGG CTCGACCACT ACACCGCCCA GGCCGGGCGG
ATCGCCGACA GCATCGCGGT GCTGACCGGG GCGCGGACCG GCCGACGTTG GACCAAGCCG
ATCGTCATGG AGAGCATCCT GCGCGGAGCC ATGAGCCGCA TCAGCGCGTA TCGACGGGTA
CGACTGCATT CGACGTGCAC CGCGGCCATC GTGGGATACG CGGCCGAGGA CATCATGCAC
GCGCTGGCCG AGCTGATGGA CAACGCGACC AAGTTCTCCA AGCCGTCCGA GGACGTCCAC
GTCCATGTCG AACAGCTGTC GTCGGGCGTG GTCATCATCG TGGAGGACGC GGGGATCGGC
ATGAAGCCGC AGGTGCTCGA ACGTGCCGAA CGCGCCGTGT CGACCACCGA GCCGCTCGAC
CTCGTCGCCC TGTCCGGTAC CCGCCTCGGT CTGGCCGTCG TGGGGTGCCT GGCCCGGAAA
CACCAGTTAC GGGTGCGGTT CCGTCGTTCA CCGCGCGGCG GTGTCAGCGC GGTGCTGCGC
ATCCCGGCCG TCCTCGTCAC CCAGCCCCGA GCCGAGGACG AACCCACCGT GCGCAACCGT
CGTCCGGTCG AGACCGACTC GCCGCGCTCG ACGCAGCCCG CGTCGCAGTC GTCGGCCGCC
CGGTTGCCGA AGCGGCGGCG CGGTCAGACA CTCGTGAGTT CCCCACCACC TCGGACACGG
CATCGCGTGG AGACCAAGCC CCGCGCCGAC GCGGGTGCCC GGTTCAACGC CTTCCGCGCC
GCGGTGCGGC CGGACACCCC ACCGACCACA GCCGATTGA
|
|---|
| Protein sequence | MWVCLETVAS QRIPVIVAGG VTVALLGAAT FVAVMHTLQL WQVQRRVESV EDELTQLADE
ILPVAARRLR EGASLATISA EIPSLSNDVP FRILRLFMKE IEASERQREA AMSACANAAG
RMQAMAVGML ADLREMEYRH NEDVLGDLLR LDHYTAQAGR IADSIAVLTG ARTGRRWTKP
IVMESILRGA MSRISAYRRV RLHSTCTAAI VGYAAEDIMH ALAELMDNAT KFSKPSEDVH
VHVEQLSSGV VIIVEDAGIG MKPQVLERAE RAVSTTEPLD LVALSGTRLG LAVVGCLARK
HQLRVRFRRS PRGGVSAVLR IPAVLVTQPR AEDEPTVRNR RPVETDSPRS TQPASQSSAA
RLPKRRRGQT LVSSPPPRTR HRVETKPRAD AGARFNAFRA AVRPDTPPTT AD
|
|---|
| |