| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_06800 |
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| Symbol | |
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| ID | 8386018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 691114 |
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| End bp | 694314 |
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| Gene Length | 3201 bp |
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| Protein Length | 1066 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644974777 |
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| Product | DNA/RNA helicase, superfamily I |
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| Protein accession | YP_003132578 |
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| Protein GI | 257054746 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.860602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.467007 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGACCC CGGAACCACC GGTCCCACCA CAGACGTGGG ACGACGGTGC CCGGTGGTTG
TTGTCCGCAC CACGTGGATT CGTGCGTGTG CTCGGCGCAC CGGGTACGGG TAAGACCACC
TTGCTCGCCG CCACGGCCGC CGCGCGGATC GCCGAAGGCG CCGACGAGGA GAGCGTGCTC
GTGCTCACGG CGTCCCGTCA GGCAGCGGAT GCCCTGCGCG CGGACATCAC CCGACGGCTC
ACCGGCCACC GCGGCGAACG CGCGGGCGAG GTCCGCACGG TACGCGAACC CATCGTCCGC
ACCGTGCACT CCTACGCCTT CGCGGTGCTG CGCCTGCAAG CGGTACGCGA CGGCCTCCCC
GTCCCGCGGC TGCTGTCCGG ACCCGAACAG GACGTCGTGG TGCGGGAACT GCTCGCGGGT
GACCTCGAAC GCGGTGCGCC CGATTGGCCC GAACCACTAC GCCCGGCGCT GGCGGTCCCC
GGATTCGCAG AAGAGCTGCG TGACCTGCTG TTGCGCGCCG CCGAACGTGG TCTGGGCCCC
GAGGACCTCA TCAAATTGGG GCATCGACAG GGTCGGGACG AATGGGTGGC CGCCGGTCGC
TTCTGGCGTC AGTACGAGGA GGTCACCCTG TTGCAGGGCG TGGGCGGACA CGCCGTCGGG
GAATCGGGGG CTCCCGCTCT CGACGCCGCC GAGCTGGTCG CCAGCGCGCT CGTGGAACTG
GAGGGGGACC CCGAGCTGCT CGCCGGGGAA CAGGCGCGCG TGCGACACCT GTTCGTGGAC
GACGCGCAGC ATCTCGACCC GCTGCAGTAC CGCCTGGTGC GGCTGCTGGC GGAGACCGCC
TCCGACGCCG TGTTGGCCGG TGATCCCGAT CAATCCGTGT TCTCCTTCCG GGGCGCCGAT
CCCCGACTGT TCGCCGACGC CGATCCGGAC GGGGACCGCA CCGTCGTCCT GACGCGGTCC
CATCGGCTCG ATCCCGTCGT GCACGAGGCC GTGGGGCGGA TCGCGGCGAC CCTGCCCGGG
ACGTCCGCGC ACCGGGCGTC GGTGCCCACA CCGACTCGGG GACGTGAGGG GAGGGGGAAG
GTACGGACGA GGTTGTCGCC GACCCCCGCG GCCGAGGCGG CGTGGATCGC CGACCAGTTG
CGGCGTGCGC ACCTGCTCGA CGGTGTGCCG TGGTCGCAGA TGGCGGTGTT GATGCGATCG
GTGTCGCGGT CGTTGCCGGT GTTGCAACGG GCGTTGACGA TGGCGGGGAT TCCCGTTGCG
GCGGTCACCG AGGAGCTGCC GTTGGCGCGG CAGCCGGCGG TTCGGCCTCT GCTGACGGTG
CTGTGGGCGG CCGCCGACCC CAGGGTGCTC GACGCGGAGA CGGCGGAGAT GTTGTTGTCG
TCGCCGCTCG GTGGTGCTGA TCCGCTCGCT TTGCGCAGGC TGCGGCGTGG GCTGCGACGG
TTGGAGCTCG TGGCCGGTGG GGAGCGGTCG AGTGACGAGT TGTTGGTGGA GGCGTTGCGC
GACGGCGACG TGCTGGCGGG ACTGGCCGAC GCGGAGGCGG CACCCGTACG TCGGGTGAGC
CGACTGCTCA CCGTGGCCCG GGAAGCGATG CGTTCCGGAG CCGGGGTCGA GGACGTGCTG
TGGCAGGTGT GGCAGGCCAG CGGACTGCAG GATCGGCTGG TGGCGCAGGC CGCCAAGGGC
GGGACTTTGG GGATGCGCGC CGATCGGGAC CTCGACGCCG TGGTGGCGTT GTTCGACGCG
GCGCGTCGTT ACGTCGATCG GTTGCCGAAG GCCGGTGTGC TCGGTTTCGT CGAGTACCTG
TCGTCCCAGC ACATCGCGGG TGACAGTCTC GCGCCCGTCG CGGTCCGGGG TTCGGGCGTG
TCGTTGTTGA CCGCCCACGG CGCGGTGGGC CGGGAGTGGT CGGTGGTGGC GATCCTGGGG
CTGCAGGAGG GCATGTGGCC GGACCTGCGG TTGCGGGGCT CGGTGCTCGG GGTCGAACGC
CTCGTCGATC TGCTGTCCGG TGTGGACGAC GACGCCGTGG CGACGGTGTC CGCCACGGCG
CCGTTGTTGG CTGAGGAGCG CCGGTTGTTC TACGTCGCCG CGAGCCGGGC CCGGCACACG
TTGTTGGTCA GCGCGGTCCA GGGGGAGGAC GAGCAGCCGT CACGTTTCTT CTTCGACCTG
GTCGATGCAG GTGTGGACAC CGAACGTGGA GGCGGGCCGG ACGTTCGGCT GGTCGCGAGG
GAACGGGGAC TGACACTGGC CGAGTTGGTG GGGGAACTCC GCGCCGCGGT CACCGACACC
GAGCTGGAGC CACGGCGTCG CAAGCTCGCC GCGCGACAGC TCGCCCGGCT GGCCAGGGAC
GGTGTGCCCG GGGCGCATCC CGAGCAGTGG TACGGGCTGG CGGGCAATTC CAGTGATCGG
CCTCTGCGGG AGCCCGACGA GGTCATCCGG GTCTCTCCGT CTGTTGTGGA CACTTTGGTG
AAGTGTCCGC TGAGATGGTT GTTGGAGCGG CACGGTGGCA CCGATCCGGC GCAGCTCTCG
GCCGTCACCG GGACTTTGGT GCACGCGTTG GCCCAGGCCG CGGCCGAGGG GACCGATGAG
CAGACCCTGT GGAAGGAACT CGACGAGGCA TGGGCCAAAG TGGACGCAGG AGCTCCGTGG
TTCTCCCGCA AGGAGCGTGT CCGGGTGGAA GGCATGGTGC GCAGTTTCCT GACGTGGTTG
CGGCAGAGCC GTGACGAGCT CACCCAACAC GCCGTGGAGC AGGACATGCG CGTGTCCTTG
CCCGAGGCCG AGGGGGAGCC GTCGGTGGCG TTGACGGGCC GGGTCGACCG ACTGGAGCTC
GACGCGGAGG GCAGGCCTGT GGTCATCGAC CTGAAGACGA GCAAGAGTCC GGTCGCCAAG
GACGCCGCGG CGGAGCACCC CCAGCTGGCG GTCTACCAGC TCGCCACCCT GCTCGGCGCT
TTCTCCGGCC ACAAAGGACA CACCGGTGGG GCTCGGTTGT TGTACGTCGG TAAGCCCAAC
GCCAAGACCG GCGCCACCGT GCGCGAGCAG CCCGCGTTGG ACGAGGAGAC GGCGCGACGA
TGGTTGAACG AGGTGCGTAA GGCGGCGGTC GACACGGTCG GGCCGACGTA CCCGGTGCGG
GAGAACGTGG ACTGCTCCCG GTGCCCCTCC CGTTCGGCGT GCCCGTTGCG ACCCGAGGGC
AGGCAGGTGA CGGGGCCGTG A
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| Protein sequence | MRTPEPPVPP QTWDDGARWL LSAPRGFVRV LGAPGTGKTT LLAATAAARI AEGADEESVL
VLTASRQAAD ALRADITRRL TGHRGERAGE VRTVREPIVR TVHSYAFAVL RLQAVRDGLP
VPRLLSGPEQ DVVVRELLAG DLERGAPDWP EPLRPALAVP GFAEELRDLL LRAAERGLGP
EDLIKLGHRQ GRDEWVAAGR FWRQYEEVTL LQGVGGHAVG ESGAPALDAA ELVASALVEL
EGDPELLAGE QARVRHLFVD DAQHLDPLQY RLVRLLAETA SDAVLAGDPD QSVFSFRGAD
PRLFADADPD GDRTVVLTRS HRLDPVVHEA VGRIAATLPG TSAHRASVPT PTRGREGRGK
VRTRLSPTPA AEAAWIADQL RRAHLLDGVP WSQMAVLMRS VSRSLPVLQR ALTMAGIPVA
AVTEELPLAR QPAVRPLLTV LWAAADPRVL DAETAEMLLS SPLGGADPLA LRRLRRGLRR
LELVAGGERS SDELLVEALR DGDVLAGLAD AEAAPVRRVS RLLTVAREAM RSGAGVEDVL
WQVWQASGLQ DRLVAQAAKG GTLGMRADRD LDAVVALFDA ARRYVDRLPK AGVLGFVEYL
SSQHIAGDSL APVAVRGSGV SLLTAHGAVG REWSVVAILG LQEGMWPDLR LRGSVLGVER
LVDLLSGVDD DAVATVSATA PLLAEERRLF YVAASRARHT LLVSAVQGED EQPSRFFFDL
VDAGVDTERG GGPDVRLVAR ERGLTLAELV GELRAAVTDT ELEPRRRKLA ARQLARLARD
GVPGAHPEQW YGLAGNSSDR PLREPDEVIR VSPSVVDTLV KCPLRWLLER HGGTDPAQLS
AVTGTLVHAL AQAAAEGTDE QTLWKELDEA WAKVDAGAPW FSRKERVRVE GMVRSFLTWL
RQSRDELTQH AVEQDMRVSL PEAEGEPSVA LTGRVDRLEL DAEGRPVVID LKTSKSPVAK
DAAAEHPQLA VYQLATLLGA FSGHKGHTGG ARLLYVGKPN AKTGATVREQ PALDEETARR
WLNEVRKAAV DTVGPTYPVR ENVDCSRCPS RSACPLRPEG RQVTGP
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