Gene Svir_06420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_06420 
Symbol 
ID8385980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp656040 
End bp656699 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content67% 
IMG OID644974739 
Productpredicted O-methyltransferase 
Protein accessionYP_003132540 
Protein GI257054708 
COG category[R] General function prediction only 
COG ID[COG4122] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACTCCG AGACGCACAT CACCGGTTGG GTCGATCTCG GCGAATTCAT CGAGGCGTAC 
CTTCCCGAGG ACGACGTCCT GGCCTCGGCT CGCCTTCGCG CGGAACAACT CGGCTGCCCA
CCGGTGTCCT GTGCCACGGG TTCGCTGCTC AGTTTCCTGG CGGCATCCCT TCAGGCCCGA
GCGATCGTCG AGATCGGAAC CGGAGCGGGC GTCAGTGGTC TGTACCTGCT TCGCGGAATG
GCCAAGGACG GCGTACTGAC CTCGATCGAC ATCGAGCCGG AGTTCCATCG CAGCGCACGT
CAGTCGTTCC TCGACGCCGG ATATCCGGCA GGGCGCACGC GCCTGATCAT AGGAAGGGCG
ATGGACGTGC TGTCGAGACT CACCACCGGC GGGTACGACA TGGTGTTCGC CGACGCCTCC
CGCGTGGAGT ATCCCGGATA CTTCGACCTC GGCGTACAAC TGCTCCGCCC CGGTGGCGTG
ATCGCGTTCC ACAACGTACT GGCCGCGGGT CGGATCGCCG ACCCGACGAG ACGAGAACCG
GAGCTGCTCG CGCTGCGTGA CGTGGCGCGA GCGGTACGGG AGGACAAGCG CCTGGTACCC
ACCCTGCTGC CCGTGGGCAA CGGCCTGCTG GTGGCGGCGG TCGCCACCCC GGAGGACTGA
 
Protein sequence
MNSETHITGW VDLGEFIEAY LPEDDVLASA RLRAEQLGCP PVSCATGSLL SFLAASLQAR 
AIVEIGTGAG VSGLYLLRGM AKDGVLTSID IEPEFHRSAR QSFLDAGYPA GRTRLIIGRA
MDVLSRLTTG GYDMVFADAS RVEYPGYFDL GVQLLRPGGV IAFHNVLAAG RIADPTRREP
ELLALRDVAR AVREDKRLVP TLLPVGNGLL VAAVATPED